Click here to switch to the map view.

The map label for this gene is 167622360

Identifier: 167622360

GI number: 167622360

Start: 495388

End: 495636

Strand: Reverse

Name: 167622360

Synonym: Shal_0420

Alternate gene names: NA

Gene position: 495636-495388 (Counterclockwise)

Preceding gene: 167622361

Following gene: 167622359

Centisome position: 9.48

GC content: 44.58

Gene sequence:

>249_bases
ATGGTCACTCAACTCGATCCAAGCACCTTAGGCAAACTAATCAAAGACCGCCGAAAGGCCGCTAACATGACTCAGGAAGT
CGCCGCATCATTCTGTGGTGTTACCAAGAAGACCTTAATCAGAGTGGAAAAAGGTGAAGATGTATACTTTTCAACTATCG
TCAAAATCCTCAGTGGCCTTGGTATAAAGCTGACCGTCGATACACCTAATAGCAAAAACAACTTAGGGGGCAGCAATGAG
TGGTTCTAA

Upstream 100 bases:

>100_bases
CTGCCACCTGCGCTAATAGTGTAGGTTGTTACACTTTCAGCTTGATTCATGATATACAAAGCACTAAAGTAACCATAAGT
ACACTTTTAATGGCGGCACC

Downstream 100 bases:

>100_bases
CTTTCACGCCCTAGAGATGCACTTTAGAGGCATGATTATTGGGTCGATTGGTTTTGACATAGACACTGAACAATTTTCTA
TCGAATACACTAAAGCTTGG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transciptional Regulator

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MVTQLDPSTLGKLIKDRRKAANMTQEVAASFCGVTKKTLIRVEKGEDVYFSTIVKILSGLGIKLTVDTPNSKNNLGGSNE
WF

Sequences:

>Translated_82_residues
MVTQLDPSTLGKLIKDRRKAANMTQEVAASFCGVTKKTLIRVEKGEDVYFSTIVKILSGLGIKLTVDTPNSKNNLGGSNE
WF
>Mature_82_residues
MVTQLDPSTLGKLIKDRRKAANMTQEVAASFCGVTKKTLIRVEKGEDVYFSTIVKILSGLGIKLTVDTPNSKNNLGGSNE
WF

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8975; Mature: 8975

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTQLDPSTLGKLIKDRRKAANMTQEVAASFCGVTKKTLIRVEKGEDVYFSTIVKILSGL
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHEEECCCCCHHHHHHHHHHHCC
GIKLTVDTPNSKNNLGGSNEWF
CCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTQLDPSTLGKLIKDRRKAANMTQEVAASFCGVTKKTLIRVEKGEDVYFSTIVKILSGL
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHEEECCCCCHHHHHHHHHHHCC
GIKLTVDTPNSKNNLGGSNEWF
CCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA