| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622321
Identifier: 167622321
GI number: 167622321
Start: 446934
End: 447188
Strand: Reverse
Name: 167622321
Synonym: Shal_0381
Alternate gene names: NA
Gene position: 447188-446934 (Counterclockwise)
Preceding gene: 167622322
Following gene: 167622320
Centisome position: 8.56
GC content: 43.92
Gene sequence:
>255_bases ATGAGCCTAGATAACGAAGTAAAACAACTGATCATCGACTGTCTCGACCTTGAAGACGTTAGCATTGAAGATATCGACTC ACAGGCGCCGCTATTTGGGGAAGGTCTTGGACTCGACTCTATCGATGCATTAGAGCTTGGCCTTGCCATCAAGAAGCAAT TTGATGTGAAGATTGAAGCAAACTCAGATACGACAAAACAGCATTTCTATAGCGTTGCTAGCTTAGTCAGTTTCATTGAG TCACAGCGAGTCTAG
Upstream 100 bases:
>100_bases ATTTACGTTATGATGCGAATGCGGGCGGCGATGCAAAAATGGCACGGCAAATGACTCGTGACCTTGAAAACTATTATAAA CAACAATTAGATAGATACTT
Downstream 100 bases:
>100_bases GGGGGAATTATGCAAAGTCGTGAACAGATCCTAGAGATGCTGACTCAGATCCTCGTCGAAGAATTTGAAGTTGATGCCGA AGAGATCACCCCAGAAGCTT
Product: acyl carrier protein
Products: NA
Alternate protein names: Acyl-Carrier Protein; Acyl-Carrier-Protein; Acyl Carrier Domain-Containing Protein; Acyl Carrier Protein Component; Acyl Carrier Protein AcpC
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSLDNEVKQLIIDCLDLEDVSIEDIDSQAPLFGEGLGLDSIDALELGLAIKKQFDVKIEANSDTTKQHFYSVASLVSFIE SQRV
Sequences:
>Translated_84_residues MSLDNEVKQLIIDCLDLEDVSIEDIDSQAPLFGEGLGLDSIDALELGLAIKKQFDVKIEANSDTTKQHFYSVASLVSFIE SQRV >Mature_83_residues SLDNEVKQLIIDCLDLEDVSIEDIDSQAPLFGEGLGLDSIDALELGLAIKKQFDVKIEANSDTTKQHFYSVASLVSFIES QRV
Specific function: Unknown
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9274; Mature: 9142
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDNEVKQLIIDCLDLEDVSIEDIDSQAPLFGEGLGLDSIDALELGLAIKKQFDVKIEA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEC NSDTTKQHFYSVASLVSFIESQRV CCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLDNEVKQLIIDCLDLEDVSIEDIDSQAPLFGEGLGLDSIDALELGLAIKKQFDVKIEA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEC NSDTTKQHFYSVASLVSFIESQRV CCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA