Click here to switch to the map view.

The map label for this gene is 167622318

Identifier: 167622318

GI number: 167622318

Start: 444752

End: 446131

Strand: Reverse

Name: 167622318

Synonym: Shal_0378

Alternate gene names: NA

Gene position: 446131-444752 (Counterclockwise)

Preceding gene: 167622319

Following gene: 167622317

Centisome position: 8.54

GC content: 51.09

Gene sequence:

>1380_bases
ATGACGGAACTACTTAAATCTTGGCTATGCCAAGGCCCAGCTGCACAGCAGCTAATTAGCTTCAATCATCACGATATCGT
GACGGGTTCAGCGTTTACCGCCCAAGTCGCGCAGCTGCAACAACAACTCACTGACTCAGACTCCCAGCGCTGGCTGCTAT
GTTGCGATAGCAGCGATCTGTTTGCCGTTGGACTGTGTGCGGGTTTACTTGCTGGTAAACAGATTATCCTGCCAGCGAAT
ACTCAAGCGGGTACCTTAAGTGAACTCACTCACGAGTATGATGGCGTACTCGCCAACATGCCCATCTGTGAAGGCAAAGC
GTTTTTACGTCTCGATAAAGATCTCAACCCACCCACCAGTGACTGGCCGCAAACAGACAAGTGGGGCGAACTCGTCCTGT
TTACCTCAGGTAGCAGCGGTAAACCTAAACGAGTGGTTAAATCTATCGATCAGCTCGATGCCGAAGTCAGCGTGCTAGAG
CAGACTTTTGCCCAGCACCTGCCGCACTGTAGCGTCATCTCCACCGTATCTCACCAGCATATTTACGGTCTACTATTTAA
GATCCTCTGGCCTCTGGCTGCGAGCCGCCCATTCTTAAGCGATCTGGTCGAATACCCAGAGACCTTAAACTACTACGCGA
ACCTGTTTCCAAATCTGTGTTTGATCAGTAGTCCGGCGCAGCTGTCTCGGTTACCCGATGCCCTAGATAACGAGCGTCAA
CTGCGCGCACCAAGCCTGGTATTTAGCTCTGGCGGGCCGTTAAGTTTTGATGCATCCAAAGGCGTGGCGAACTGTTATGG
CCAAGCACCGATTGAAGTATTTGGCAGTACCGAAACGGGTGGCATCGCTTATCGTCGTCAGCAGCAGCCTAACGCCGACT
GGCAAGCTTTTGCACCAATTGAGATCCAGCAAGACCCACGCGATGGCGCACTACTGCTGAAATCGCCCTACCTGCCAGAT
AACCAATGGCTAAAGTGCGATGACAAGATTGACCTGCATGCCGATGGTAAATTTACCCTTCAAGGCCGCTTAGACCGAAT
TATCAAAGTCGAAGAGAAGCGCCTGTCGCTGGTGCAGATGGAGTCCCTATTAGAGAGCCATCCCTATGTGGCCAAAGCCG
CGCTGCTGATGCTTGAGCAGCCTAAAGTGCAGCTCGGTGCTGCCATTGAGCTTTCAGAACAGGGGTTAGAACAACTCGAA
GCAAACGGCAAGTTAGCCCTCAATAACCAATTAAAAAATCACCTATTATCACAGTTTGAGCGGGTCACCCTACCAAGACG
CTGGCGCTATGTAGAGCAGCTGCCACTGGATCAGCAGGGTAAGCGCGTTCAATCTTGCATGTTAGCCCTATTCGATATCG
ATAAGTTTAAGAGCAAATGA

Upstream 100 bases:

>100_bases
TCGAAACATGGACGCTTTATAACGGGCTGATCGCCTATCTGCTTATCGGGTCGCTACTGGGTGGCGAATGGTTATACAGA
ACATTTTGGTTGAAAAAGTC

Downstream 100 bases:

>100_bases
TTAAATCTAAATTGCCCACCATCATCAGTTGCAGCAAGGCTCAAGACTCTGTGACTTGGCGGCTCGATATTGCTGCCGAT
CTCGACTATTTCAATGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: CoA Ligase; AMP-Ligase; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase; Acyl-Co A Synthetase; AMP-(Fatty) Acid Ligase; Acyl-CoA Synthetase; 4-Coumarate-CoA Ligase; Acyl-Co A Synthetases/AMP-(Fatty) Acid Ligases-Like Protein; Peptide Synthase; Trigger Factor; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase Related Enzyme; Amp-Dependent Synthetase Or Ligase Protein; 3-Phosphoshikimate 1-Carboxyvinyltransferase; Amp-Dependent Synthetase And Ligase Family Protein; AMP-(Fatty)Acid Ligase; Acyl-Co A Synthetases/AMP-(Fatty) Acid Ligase; Secondary Metabolite Synthesis Protein; Surfactin Synthetase; Acyl-Co A Synthetase-Related Protein; Aconitate Hydratase; Fatty Acid Degradation; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase-Like; AMP-(Fatty)Acid Ligases; Fatty Acid CoA Ligase; Acetyl-Co A Synthetase

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MTELLKSWLCQGPAAQQLISFNHHDIVTGSAFTAQVAQLQQQLTDSDSQRWLLCCDSSDLFAVGLCAGLLAGKQIILPAN
TQAGTLSELTHEYDGVLANMPICEGKAFLRLDKDLNPPTSDWPQTDKWGELVLFTSGSSGKPKRVVKSIDQLDAEVSVLE
QTFAQHLPHCSVISTVSHQHIYGLLFKILWPLAASRPFLSDLVEYPETLNYYANLFPNLCLISSPAQLSRLPDALDNERQ
LRAPSLVFSSGGPLSFDASKGVANCYGQAPIEVFGSTETGGIAYRRQQQPNADWQAFAPIEIQQDPRDGALLLKSPYLPD
NQWLKCDDKIDLHADGKFTLQGRLDRIIKVEEKRLSLVQMESLLESHPYVAKAALLMLEQPKVQLGAAIELSEQGLEQLE
ANGKLALNNQLKNHLLSQFERVTLPRRWRYVEQLPLDQQGKRVQSCMLALFDIDKFKSK

Sequences:

>Translated_459_residues
MTELLKSWLCQGPAAQQLISFNHHDIVTGSAFTAQVAQLQQQLTDSDSQRWLLCCDSSDLFAVGLCAGLLAGKQIILPAN
TQAGTLSELTHEYDGVLANMPICEGKAFLRLDKDLNPPTSDWPQTDKWGELVLFTSGSSGKPKRVVKSIDQLDAEVSVLE
QTFAQHLPHCSVISTVSHQHIYGLLFKILWPLAASRPFLSDLVEYPETLNYYANLFPNLCLISSPAQLSRLPDALDNERQ
LRAPSLVFSSGGPLSFDASKGVANCYGQAPIEVFGSTETGGIAYRRQQQPNADWQAFAPIEIQQDPRDGALLLKSPYLPD
NQWLKCDDKIDLHADGKFTLQGRLDRIIKVEEKRLSLVQMESLLESHPYVAKAALLMLEQPKVQLGAAIELSEQGLEQLE
ANGKLALNNQLKNHLLSQFERVTLPRRWRYVEQLPLDQQGKRVQSCMLALFDIDKFKSK
>Mature_458_residues
TELLKSWLCQGPAAQQLISFNHHDIVTGSAFTAQVAQLQQQLTDSDSQRWLLCCDSSDLFAVGLCAGLLAGKQIILPANT
QAGTLSELTHEYDGVLANMPICEGKAFLRLDKDLNPPTSDWPQTDKWGELVLFTSGSSGKPKRVVKSIDQLDAEVSVLEQ
TFAQHLPHCSVISTVSHQHIYGLLFKILWPLAASRPFLSDLVEYPETLNYYANLFPNLCLISSPAQLSRLPDALDNERQL
RAPSLVFSSGGPLSFDASKGVANCYGQAPIEVFGSTETGGIAYRRQQQPNADWQAFAPIEIQQDPRDGALLLKSPYLPDN
QWLKCDDKIDLHADGKFTLQGRLDRIIKVEEKRLSLVQMESLLESHPYVAKAALLMLEQPKVQLGAAIELSEQGLEQLEA
NGKLALNNQLKNHLLSQFERVTLPRRWRYVEQLPLDQQGKRVQSCMLALFDIDKFKSK

Specific function: Unknown

COG id: COG0365

COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51121; Mature: 50990

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELLKSWLCQGPAAQQLISFNHHDIVTGSAFTAQVAQLQQQLTDSDSQRWLLCCDSSDL
CHHHHHHHHCCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
FAVGLCAGLLAGKQIILPANTQAGTLSELTHEYDGVLANMPICEGKAFLRLDKDLNPPTS
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCEEECCCCCCCCEEEEECCCCCCCCC
DWPQTDKWGELVLFTSGSSGKPKRVVKSIDQLDAEVSVLEQTFAQHLPHCSVISTVSHQH
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IYGLLFKILWPLAASRPFLSDLVEYPETLNYYANLFPNLCLISSPAQLSRLPDALDNERQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCHHHCCCCH
LRAPSLVFSSGGPLSFDASKGVANCYGQAPIEVFGSTETGGIAYRRQQQPNADWQAFAPI
HCCCEEEEECCCCEEECCCCCHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCEEECCE
EIQQDPRDGALLLKSPYLPDNQWLKCDDKIDLHADGKFTLQGRLDRIIKVEEKRLSLVQM
EECCCCCCCEEEEECCCCCCCCEEEECCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHH
ESLLESHPYVAKAALLMLEQPKVQLGAAIELSEQGLEQLEANGKLALNNQLKNHLLSQFE
HHHHHHCCHHHHHHHHHHCCCCHHHCCEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
RVTLPRRWRYVEQLPLDQQGKRVQSCMLALFDIDKFKSK
HHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TELLKSWLCQGPAAQQLISFNHHDIVTGSAFTAQVAQLQQQLTDSDSQRWLLCCDSSDL
HHHHHHHHCCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
FAVGLCAGLLAGKQIILPANTQAGTLSELTHEYDGVLANMPICEGKAFLRLDKDLNPPTS
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCEEECCCCCCCCEEEEECCCCCCCCC
DWPQTDKWGELVLFTSGSSGKPKRVVKSIDQLDAEVSVLEQTFAQHLPHCSVISTVSHQH
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IYGLLFKILWPLAASRPFLSDLVEYPETLNYYANLFPNLCLISSPAQLSRLPDALDNERQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCHHHCCCCH
LRAPSLVFSSGGPLSFDASKGVANCYGQAPIEVFGSTETGGIAYRRQQQPNADWQAFAPI
HCCCEEEEECCCCEEECCCCCHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCEEECCE
EIQQDPRDGALLLKSPYLPDNQWLKCDDKIDLHADGKFTLQGRLDRIIKVEEKRLSLVQM
EECCCCCCCEEEEECCCCCCCCEEEECCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHH
ESLLESHPYVAKAALLMLEQPKVQLGAAIELSEQGLEQLEANGKLALNNQLKNHLLSQFE
HHHHHHCCHHHHHHHHHHCCCCHHHCCEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
RVTLPRRWRYVEQLPLDQQGKRVQSCMLALFDIDKFKSK
HHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA