| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is pspE [C]
Identifier: 167622305
GI number: 167622305
Start: 430407
End: 430742
Strand: Reverse
Name: pspE [C]
Synonym: Shal_0365
Alternate gene names: 167622305
Gene position: 430742-430407 (Counterclockwise)
Preceding gene: 167622306
Following gene: 167622300
Centisome position: 8.24
GC content: 48.21
Gene sequence:
>336_bases ATGTTAAACACTCAAATATCAAAGTTATCGACCAAGCCTGCTAGTAGTCAATGCTGGCAGTTGATAGAAGAAGGTGCGAC CGTGATTGATGTGCGCTCACCGCAAGAGTTTGCCAGTGGTCACCTGCCGCAAGCGATCAATGTGCCGTTAGACAACTTAA ATAAGTTAGATACTTGGCTGCACAAAGTGGAGAACCGTCAGCAAGTGTTTGTACTTTATTGCGGCGCAGGTATCCGCGCG CAAAAGGGCTGCGATATCTTAACGGCTAACGGCTTAGAGTGCGTGATCAATGGCGGCGCATTAAAAGATCTGCTTGGCTG TCAGCCAAAGCGCTAA
Upstream 100 bases:
>100_bases AATTAATCTAATTAAAGGTTTAAATGTCTGCACAAGTTTTGTTCAGCTAGCTTCAAACAAAACCTAACAAAATCAATCAG CATAATAAATAGAGGTGGAT
Downstream 100 bases:
>100_bases TACTGTTCGGGATAAACTTACCTCCCCTTGCTGACATAAAGGCCTGAAAAGCAGGCACACAGCTTGTCGTTACAATACAA CTCGACCTCTAGCCGTACCT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Phage Shock Protein E; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Protein
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MLNTQISKLSTKPASSQCWQLIEEGATVIDVRSPQEFASGHLPQAINVPLDNLNKLDTWLHKVENRQQVFVLYCGAGIRA QKGCDILTANGLECVINGGALKDLLGCQPKR
Sequences:
>Translated_111_residues MLNTQISKLSTKPASSQCWQLIEEGATVIDVRSPQEFASGHLPQAINVPLDNLNKLDTWLHKVENRQQVFVLYCGAGIRA QKGCDILTANGLECVINGGALKDLLGCQPKR >Mature_111_residues MLNTQISKLSTKPASSQCWQLIEEGATVIDVRSPQEFASGHLPQAINVPLDNLNKLDTWLHKVENRQQVFVLYCGAGIRA QKGCDILTANGLECVINGGALKDLLGCQPKR
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12130; Mature: 12130
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTQISKLSTKPASSQCWQLIEEGATVIDVRSPQEFASGHLPQAINVPLDNLNKLDTWL CCCCCCCHHCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHH HKVENRQQVFVLYCGAGIRAQKGCDILTANGLECVINGGALKDLLGCQPKR HHHCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEECCCHHHHHHCCCCCC >Mature Secondary Structure MLNTQISKLSTKPASSQCWQLIEEGATVIDVRSPQEFASGHLPQAINVPLDNLNKLDTWL CCCCCCCHHCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHH HKVENRQQVFVLYCGAGIRAQKGCDILTANGLECVINGGALKDLLGCQPKR HHHCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEECCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA