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The map label for this gene is fdoI [C]

Identifier: 167622052

GI number: 167622052

Start: 125385

End: 126365

Strand: Direct

Name: fdoI [C]

Synonym: Shal_0111

Alternate gene names: 167622052

Gene position: 125385-126365 (Clockwise)

Preceding gene: 167622051

Following gene: 167622053

Centisome position: 2.4

GC content: 46.18

Gene sequence:

>981_bases
ATGAACAAATGGTTCAAACACATAGGCGTGGCAATTGCACTATTATTTAGTGTGTCTGTATTTGCCCACGACGCCCCTAA
AGTGGGTGACACTAATGAAGTAAATGGTCAAATCTGGGCTCAGCTAAAAGCGGGCGAGGAAGGCTATACAACTTCAACAA
GTGAGTTCCACGGTCAAGCAATCAACACCTATGATCTACGTGTACTTGAGTTGCGCAGTGATATTCTTGCTCCAGCTATG
ATGGCAGCCCTTTTCGGCATGATCATCATCTTTGTACTGTTTATCAAAGTGAACGGTATTTCTAAGCTGCACGGTGGTTT
CTCTGGCAAGTTGGTTTACCGTTGGTCTAAGTTTGATGTATCAATTCACTGGCTAGGTGCGATCCCTTGTCTGTTATTGA
TCCTGACAGGCTTAACGTTACTGGCTGGGCGTTTCTTCTTCCAGCCGTACATAGGTGAAGGCTTATGGGCCGGTCTCGTT
AACGCTGCTAAGCAGATCCACGACATCATGGCGATCCCGTTCATGATTGGTTGGGCGCTGATGACAGTGCTTTGGGCTAA
GAACCAGATGCCTAAGATGTATGACCTTAAGTGGATGATGGTTGTTGGTGGTTACATCAACTTTGGTCCATTCAAAGGTA
AGCACCCAGACGCGGGTTTTGCTAACGCCGGTGAGAAATTATGGTTCTGGGCATTCGCTGTGTTCGGTTTAGTGGTTTCA
GCATCAGGTATGTTGTTGCTATTCCCGAACTTGTTCGAGCCTAGCCGCACACTGAGCTTAGTGGCGCTAATTCTTCACTC
TGTCGGTGCTATCATCATTACTGCTTTCTCAATCGTGCATATCTTCATGGCAACGGTTATGTCTGAAGGCGGTATGGAAT
GTATGGTTTCTGGTTACTGTGATGAAACATGGGCCAGCCAGCACCATAACCTTTGGTTCGATGAGATCAAAGAAAACGGT
ACCCTTAAGTATAAAGACTAG

Upstream 100 bases:

>100_bases
TTCTAACAAGAATGTTTGGGGCTAAGCCTTAGATATTGAGTTAGTCCATAATCGCTGCAAGCTGTCTTACTGAGCTAGCT
TGCAGCAATCAGGAGGTGAC

Downstream 100 bases:

>100_bases
TACTCGTTTGATTATTATCTTTAAATGCCCCGACTCAGTCGGGGCATTTTTTTATTTAATAGCCGCCTAATTCGTGGCGC
CTTGTTTGTATAAGCTTGTT

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH

Alternate protein names: Formate Dehydrogenase Cytochrome; Formate Dehydrogenase Subunit Gamma; Formate Dehydrogenase Subunit C; Formate Dehydrogenase Cytochrome B Subunit; Formate Dehydrogenase C Subunit; Formate Dehydrogenase; Formate Dehydrogenase-N; Cytochrome B Subunit Of Formate Dehydrogenase; Formate Dehydrogenase Subunit C FdnI; Formate Dehydrogenase Cytochromesubunit B; Cytochrome; Formate Dehydrogenase Cytochrome C Subunit Gamma Subunit; Formate Dehydrogenase N Gamma Subunit

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNKWFKHIGVAIALLFSVSVFAHDAPKVGDTNEVNGQIWAQLKAGEEGYTTSTSEFHGQAINTYDLRVLELRSDILAPAM
MAALFGMIIIFVLFIKVNGISKLHGGFSGKLVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGLWAGLV
NAAKQIHDIMAIPFMIGWALMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVVS
ASGMLLLFPNLFEPSRTLSLVALILHSVGAIIITAFSIVHIFMATVMSEGGMECMVSGYCDETWASQHHNLWFDEIKENG
TLKYKD

Sequences:

>Translated_326_residues
MNKWFKHIGVAIALLFSVSVFAHDAPKVGDTNEVNGQIWAQLKAGEEGYTTSTSEFHGQAINTYDLRVLELRSDILAPAM
MAALFGMIIIFVLFIKVNGISKLHGGFSGKLVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGLWAGLV
NAAKQIHDIMAIPFMIGWALMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVVS
ASGMLLLFPNLFEPSRTLSLVALILHSVGAIIITAFSIVHIFMATVMSEGGMECMVSGYCDETWASQHHNLWFDEIKENG
TLKYKD
>Mature_326_residues
MNKWFKHIGVAIALLFSVSVFAHDAPKVGDTNEVNGQIWAQLKAGEEGYTTSTSEFHGQAINTYDLRVLELRSDILAPAM
MAALFGMIIIFVLFIKVNGISKLHGGFSGKLVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGLWAGLV
NAAKQIHDIMAIPFMIGWALMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVVS
ASGMLLLFPNLFEPSRTLSLVALILHSVGAIIITAFSIVHIFMATVMSEGGMECMVSGYCDETWASQHHNLWFDEIKENG
TLKYKD

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790325, Length=109, Percent_Identity=32.1100917431193, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787750, Length=221, Percent_Identity=23.0769230769231, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.2

Molecular weight: Translated: 36257; Mature: 36257

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWFKHIGVAIALLFSVSVFAHDAPKVGDTNEVNGQIWAQLKAGEEGYTTSTSEFHGQA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCC
INTYDLRVLELRSDILAPAMMAALFGMIIIFVLFIKVNGISKLHGGFSGKLVYRWSKFDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEEEEE
SIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGLWAGLVNAAKQIHDIMAIPFMIGWAL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVVS
HHHHHHCCCCCCHHHHEEHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ASGMLLLFPNLFEPSRTLSLVALILHSVGAIIITAFSIVHIFMATVMSEGGMECMVSGYC
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
DETWASQHHNLWFDEIKENGTLKYKD
CHHHHHCCCCCCHHHHCCCCCEEECC
>Mature Secondary Structure
MNKWFKHIGVAIALLFSVSVFAHDAPKVGDTNEVNGQIWAQLKAGEEGYTTSTSEFHGQA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCC
INTYDLRVLELRSDILAPAMMAALFGMIIIFVLFIKVNGISKLHGGFSGKLVYRWSKFDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEEEEE
SIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGLWAGLVNAAKQIHDIMAIPFMIGWAL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVVS
HHHHHHCCCCCCHHHHEEHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ASGMLLLFPNLFEPSRTLSLVALILHSVGAIIITAFSIVHIFMATVMSEGGMECMVSGYC
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
DETWASQHHNLWFDEIKENGTLKYKD
CHHHHHCCCCCCHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA