| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16753081
GI number: 16753081
Start: 570043
End: 570738
Strand: Direct
Name: Not Available
Synonym: CP0529
Alternate gene names: NA
Gene position: 570043-570738 (Clockwise)
Preceding gene: 16752804
Following gene: 16752805
Centisome position: 46.35
GC content: 39.51
Gene sequence:
>696_bases ATGTTGCAGAGTTGCAAAAAGGCCTTATTATCCATAGTAGTATCGATTTTAGCTTTTCACCCTATCCCTGGTATGGGAGT CGAAGCTAAATCTGGTTTTTTAGGGAAAGTCAAAGGATGGTTCTCAAAAAAAGAGATTCAGGAAGAGGCTAGAATTTTAC CAGTTAAAGACAGTCTTTCATGGAAACGCTATGACTATACATCAAGTTCTGGGTTTTCTGTGGAATTTCCTGGGGAGCCT GATCATTCGGGGCAAATTGTAGAAGTCCCTCAATCAGAGATTACCATACGTTATGATACCTATGTAACAGAGACTCATCC AGACAACACTGTGTATGTAGTCTCTGTTTGGGAGTATCCTGAAAAAGTAGATATAAGTCGTCCAGAGCTCAATCTGCAAG AGGGGTTTTCAGGCATGATGCAGGCTCTCCCTGAATCCCAGGTTCTTTTCATGCAAGCAAGGCAGATTCAAGGCCATAAG GCTTTGGAATTTTGGATTGTTTGCGAAGATGTTTATTTCAGAGGGATGTTGATTTCCGTAAATCACACTCTTTATCAAGT CTTTATGGTTTATAAGAATAAGAATCCTCAGGCCTTGGATAAAGAATACGAGGCGTTTTCTCAGTCTTTTAAAATTACTA AAATACGAGAACCAAGAACGATTCCTTCTTCAGTGAAAAAGAAAGTGAGTCTGTAA
Upstream 100 bases:
>100_bases TTTTTTTATTTTTCTGAAAAAAAAGTATTTTATTTTACAAAATAAAAATCTCGAAGGGATATTATTAAGTTAGTTATCTT GTTTTGTTTTTTAGTTTATT
Downstream 100 bases:
>100_bases GATTCTATATTTTGGATTTGTGTTTTAAGAACCATTGCCGGGTTGGCAATGGTTTTTTTATTTATATTCTCAATATACTA GGCATCTGAAAGCTCTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLQSCKKALLSIVVSILAFHPIPGMGVEAKSGFLGKVKGWFSKKEIQEEARILPVKDSLSWKRYDYTSSSGFSVEFPGEP DHSGQIVEVPQSEITIRYDTYVTETHPDNTVYVVSVWEYPEKVDISRPELNLQEGFSGMMQALPESQVLFMQARQIQGHK ALEFWIVCEDVYFRGMLISVNHTLYQVFMVYKNKNPQALDKEYEAFSQSFKITKIREPRTIPSSVKKKVSL
Sequences:
>Translated_231_residues MLQSCKKALLSIVVSILAFHPIPGMGVEAKSGFLGKVKGWFSKKEIQEEARILPVKDSLSWKRYDYTSSSGFSVEFPGEP DHSGQIVEVPQSEITIRYDTYVTETHPDNTVYVVSVWEYPEKVDISRPELNLQEGFSGMMQALPESQVLFMQARQIQGHK ALEFWIVCEDVYFRGMLISVNHTLYQVFMVYKNKNPQALDKEYEAFSQSFKITKIREPRTIPSSVKKKVSL >Mature_231_residues MLQSCKKALLSIVVSILAFHPIPGMGVEAKSGFLGKVKGWFSKKEIQEEARILPVKDSLSWKRYDYTSSSGFSVEFPGEP DHSGQIVEVPQSEITIRYDTYVTETHPDNTVYVVSVWEYPEKVDISRPELNLQEGFSGMMQALPESQVLFMQARQIQGHK ALEFWIVCEDVYFRGMLISVNHTLYQVFMVYKNKNPQALDKEYEAFSQSFKITKIREPRTIPSSVKKKVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26455; Mature: 26455
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSCKKALLSIVVSILAFHPIPGMGVEAKSGFLGKVKGWFSKKEIQEEARILPVKDSLS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCC WKRYDYTSSSGFSVEFPGEPDHSGQIVEVPQSEITIRYDTYVTETHPDNTVYVVSVWEYP EEEEECCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCEEEEEEEECCC EKVDISRPELNLQEGFSGMMQALPESQVLFMQARQIQGHKALEFWIVCEDVYFRGMLISV CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECHHHCEEEEEE NHTLYQVFMVYKNKNPQALDKEYEAFSQSFKITKIREPRTIPSSVKKKVSL HHHHEEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCC >Mature Secondary Structure MLQSCKKALLSIVVSILAFHPIPGMGVEAKSGFLGKVKGWFSKKEIQEEARILPVKDSLS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCC WKRYDYTSSSGFSVEFPGEPDHSGQIVEVPQSEITIRYDTYVTETHPDNTVYVVSVWEYP EEEEECCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCEEEEEEEECCC EKVDISRPELNLQEGFSGMMQALPESQVLFMQARQIQGHKALEFWIVCEDVYFRGMLISV CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECHHHCEEEEEE NHTLYQVFMVYKNKNPQALDKEYEAFSQSFKITKIREPRTIPSSVKKKVSL HHHHEEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA