| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752944
GI number: 16752944
Start: 712045
End: 713322
Strand: Direct
Name: Not Available
Synonym: CP0674
Alternate gene names: NA
Gene position: 712045-713322 (Clockwise)
Preceding gene: 16752943
Following gene: 16752945
Centisome position: 57.9
GC content: 36.38
Gene sequence:
>1278_bases TTGGATTTGGAAACGATGATAAAATTTTTATCTCAACTCTTTATTCGGCATTGGCCTAGAAAAGTTGTTTCCTTAGGTTT TGCCATCATCATTTGGATCCTCGTAGGACAAAGTGTTACCATCACGCGAACACTCACAAATGTCCCTGTGCGCATCGTAG ACCTACATCCAGACCAAACCGTTCTTGGACTACAAAAAAGCGGATTCCTGAATAAAAAAGTCTCTTTAACAATCACTGGG AATAAAAATACCGTTCAAGACCTCCGTCCTTCAAATTTAGAGGTAGTGATCAGTGCAGCAAACCATACGGAAAGTTGGAT TGCCACTATAGATAAGCATAACCTTGTCTCTGTAGATCATGAGATCAACATACGCAAAGACATCCATAGCGTTGACGCTA ACGATATTTTTGTCCGACTTACACAATATGTAACCGAAGACATTTTATTAACTATAACGAAACCTATAGGGAGTCCCCCG AAAGGATATGAGTATTTGGATGTCTGGCCGAAGTACTTGAATCAAAAAGTCAGTGGCCCCAAAGAATATATCAATGCTTT GAAAGAGCAAGGTCTTGAGCTAACCTTTAATTTGAATAAAATTTCGTTCGAAGAGTTAGAAAGAAATCGCATTGCTCAGG GAAGTCATGACGAAATTATTTTCCCCATTCCTAAAGAATGGAAGAAAATTTTGATTCCCTTTGAAAATACCTTCATGGAT CTCAATGACCCTCAAGCAGATTTTCTTCGCCTTTTATTTTTAAAAAGGGAATGCATTCCCCTAAATTTAAATTTACCGGT CTTTCTATTCTTTCCTGTAACCTTCATTCAAACGATGAATCCTCTAGAGTACAGCTTAGATCCTGTCCCTCCCATTATTC TGAATCATGGAATTCATCAAATAAATATTCCTTTATATGTTAAGGATGTAAGTAGACAGTTTTTAGATGTCGTAAAGAAC AACATGGTCTTAACAATTGTGATGCCCTCACCACAAGACCCTTCTTCGATCAACTGGGCTATAGAATTTTTAGATGAAAA AACTTTAGAAAATACTTTTCTTCAGACTATTATAGCCCAAGAACATGGAATTTTACACGATATAGCCCTTATTGATGAGG CTGGAATTCGTCATAGATTCCGAGAATATTTAAGAAAGCTTGCACTTTTTACAGCAGACGGTGAACCTTTAAATCTTATT GCAGAAATCAAAAATAATAAAGTTGTGATCCAGACAAAAACAAAGGAAACAACTAAATTATATAAAAAAGAGTGGTAG
Upstream 100 bases:
>100_bases GAGACGGCCTTCTAACACGCGGAGTAAAAATAGATAGATTCAAAGCGGTACTCCGCAGTATTCTTTCCCCTAAAGAACAC AAAAGAAAACCTTTATTCTC
Downstream 100 bases:
>100_bases TGCAGACTCACTAAAATTTAGTTAGGGGAAACTTTATGTGCTTAATAGATTGCTTGGGCCAGGGCTTTGAAGCTGCAATC AACACAGTTTGTTGTTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MDLETMIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITG NKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPP KGYEYLDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMD LNDPQADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKN NMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLI AEIKNNKVVIQTKTKETTKLYKKEW
Sequences:
>Translated_425_residues MDLETMIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITG NKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPP KGYEYLDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMD LNDPQADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKN NMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLI AEIKNNKVVIQTKTKETTKLYKKEW >Mature_425_residues MDLETMIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITG NKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPP KGYEYLDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMD LNDPQADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKN NMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLI AEIKNNKVVIQTKTKETTKLYKKEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48997; Mature: 48997
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLETMIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCE VLGLQKSGFLNKKVSLTITGNKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDH EECCCCCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCHHHEEECCCCEEEECC EINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEYLDVWPKYLNQKVSGP CEEEHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCH KEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMD HHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCHHHHEEEEECCCCEEC LNDPQADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQ CCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEE INIPLYVKDVSRQFLDVVKNNMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQ EECEEEEHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKNNKVVIQTKTKETTKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEEECCCHHHHH YKKEW HHCCC >Mature Secondary Structure MDLETMIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCE VLGLQKSGFLNKKVSLTITGNKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDH EECCCCCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCHHHEEECCCCEEEECC EINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEYLDVWPKYLNQKVSGP CEEEHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCH KEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMD HHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCHHHHEEEEECCCCEEC LNDPQADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQ CCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEE INIPLYVKDVSRQFLDVVKNNMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQ EECEEEEHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKNNKVVIQTKTKETTKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEEECCCHHHHH YKKEW HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA