Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752825

GI number: 16752825

Start: 584267

End: 585526

Strand: Direct

Name: Not Available

Synonym: CP0550

Alternate gene names: NA

Gene position: 584267-585526 (Clockwise)

Preceding gene: 16752824

Following gene: 16752826

Centisome position: 47.51

GC content: 39.13

Gene sequence:

>1260_bases
ATGTCTAGCGCTATTGCCCGTGATTGTTTCCCGTCTCCGTCCCCCCAACCCTCTTCAACTTTAGGAGTTCATCCACCTAA
ATATAAGTCTCTGATCCTTTCTGTATCTTTGATTGTCTTGGGTGTTCTCCTGTTATGTGTGGGGATGCTCTTGCTTGTAA
ATGCTATTTTTAGTTTTTCTGTCTTGACTGTAGGACTCGGGGGCGCAGGTGTTTTCTTAGGAAGTTTACTTTTGATTTTG
GGGCTGATTTTCTTTGTCTCTTATCACCGGAAACTTTCAGAAGCCACGAGATCATTAGAACAAAAAATTACTTTAGAATA
TCAACCGTGGGCAGATCTTAGAAAAGAGCTTAATGAAGTTCAGGAATGGAGCAATTTTCTATTAGATGAGTGGGAGGACT
TTAAAGAGGTTGTCGCTCAACATAAGAGTCAGTTCGCTACATTTGAGGGGGATCTTCTTCTGTTTGGACGTGAAGTCGAA
AAATACGAGACGATTTGGAAGGAACTAGACGGAAGGGATGTAGCGTTACTTACTGAGTTAAAGAATATCTGGGGGCCTCT
TGAATTTTTAAGGAAAAAAGGAGATCGCCTTCAATGTGAAATAGATAAGCTTCGAAAAGAAGTCATGAAAGTAGGGAAAT
CTGGATTGAAGCTTGCTTGTGAGTTGACTAAGTTTAAATCTGCTTTAAAAGACGTAAAGATAGAACAGGAATGTTATCGA
GACAAAAGGAAAGTAGAGAAACTGGAGGTGTTTCCCGAAGGTTATAGGAGGGAACTATTAGAAGTCCTAAAAACAAGGCT
TTCCGTTGAAAAAGAGATTCAACTTTTCGAAGAAGTTGTGAGTGCATTTGAAGAAAAATTAGCATCTTTACACAGAACCG
TCTTTTCTGAAGAAGAGCTGCAAGAAGCACTAGATAAAGCTAAAGCAGAACTTCTTGATATTCAAGTCAGGAAATCGGTA
GTAGAAGATCTGAGTTGTGAACCAACTCTTATTCAGTATCATTTATTGCGCCTTTATGAAGTTCAATGTCGTATTGTTGA
GCAGTTTTTAACTCAAACTTTCTCTTCGGAACAAGAGAAAGTCTTAGAGGAGTATGAGGCCTTAAAAGCACGTATTCGCA
AGACTCTTAGAGTTAAATTGGATCAAGTCAGAGCAAATGTGGCATTTGTTGCATCTACGACGGATTTGTTGAGTGAGAGC
GAATCATTAGATGGTAATGATAGTGTGTTTGAAGATGCTCACGATGATTTCTTGGATTAA

Upstream 100 bases:

>100_bases
TTTATTAAAATGTTTGTATTACTGGTTTGTTGACAAAAAGAAACTTCATTCATATAAGTGTATGGAAATTAAGTAGTTAA
CTTCAAGTAAAAAGCAAGTT

Downstream 100 bases:

>100_bases
AGGAAGACTATGAGCGTCCCACCTATTGTAACATACCTCCTGCTCCACATCCTCAACGTGTAGATTCTAAAGGATGTATT
GCTTCGCACGTTTCTACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFSVLTVGLGGAGVFLGSLLLIL
GLIFFVSYHRKLSEATRSLEQKITLEYQPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVE
KYETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEELQEALDKAKAELLDIQVRKSV
VEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSES
ESLDGNDSVFEDAHDDFLD

Sequences:

>Translated_419_residues
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFSVLTVGLGGAGVFLGSLLLIL
GLIFFVSYHRKLSEATRSLEQKITLEYQPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVE
KYETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEELQEALDKAKAELLDIQVRKSV
VEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSES
ESLDGNDSVFEDAHDDFLD
>Mature_418_residues
SSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFSVLTVGLGGAGVFLGSLLLILG
LIFFVSYHRKLSEATRSLEQKITLEYQPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVEK
YETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYRD
KRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEELQEALDKAKAELLDIQVRKSVV
EDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSESE
SLDGNDSVFEDAHDDFLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48037; Mature: 47906

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFS
CCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTVGLGGAGVFLGSLLLILGLIFFVSYHRKLSEATRSLEQKITLEYQPWADLRKELNEV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVEKYETIWKELDGRDVALLTEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHH
KNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QEALDKAKAELLDIQVRKSVVEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSESESLDGNDSVFEDAHDDFLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHCCCHHCCC
>Mature Secondary Structure 
SSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFS
CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTVGLGGAGVFLGSLLLILGLIFFVSYHRKLSEATRSLEQKITLEYQPWADLRKELNEV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVEKYETIWKELDGRDVALLTEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHH
KNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QEALDKAKAELLDIQVRKSVVEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSESESLDGNDSVFEDAHDDFLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA