| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752822
GI number: 16752822
Start: 582135
End: 582704
Strand: Direct
Name: Not Available
Synonym: CP0547
Alternate gene names: NA
Gene position: 582135-582704 (Clockwise)
Preceding gene: 16752812
Following gene: 16752824
Centisome position: 47.33
GC content: 34.21
Gene sequence:
>570_bases TTGGGGATATTTTGTTTTAAGAAAATTAATCTTTTTAAAACTTTTATTTTAATGAATAATAATGTATATTTGTTTTGTTT TTTAATTTTTTTGTCTAAAAAAGTGTTTTTCGAATCTTATGAAGATTTTGCAAATGTAGCTTCCTCCTGGCCTAAGTCTT TAAGAGCTTTGGTCCAGGGAAGGTATTTTGTTGATTCAGAACTTAAAGAGACTCCTTATCGTATTCATGACTTTAAGAAG ACTCCAATACACCATAGGCTATATCGTAGCCTTCCTATCATTTCTACCATTGGTGGAATCATTCGATTGATAGAAGCGCA TTCAGGGCCGATCCATCCTAGAGATAAAATGAAGTACAGATTCGAGGTGCTTCAAGCTGTTATTGAGATTTTAGGTTTAG GGGTTCTGATTCTTGTCTTTGATATTATAGGGTGCTTCCTTGCTTTCCTTGTCGCAATAATTCTAAGCCTACTTCTCTAT TGTAATTCAACCTTTACTTGTGTGCAGAACCTCTCCTTTACCGAAAGGATGTTAGAGGGTATAGGTGAAGCTGTTAATTT CTTAGCTTAA
Upstream 100 bases:
>100_bases TTGGGATTTCTTAGATTTAAAGTAGGGTCTTTTACTCCAAAGGAGCTTTCTGAATTCCTGGGTCTTAATACGGATAGGCG CTGGTAGGTACAATATTTTA
Downstream 100 bases:
>100_bases GAGGAACGACGATCTAAAACGGCTTTAGTTACTGTTAGAGTCGGTATAGCTAGTGTAATTACAATGCCTTTGACTAGCAT TGCAAAGATCATAACGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MGIFCFKKINLFKTFILMNNNVYLFCFLIFLSKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKK TPIHHRLYRSLPIISTIGGIIRLIEAHSGPIHPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLY CNSTFTCVQNLSFTERMLEGIGEAVNFLA
Sequences:
>Translated_189_residues MGIFCFKKINLFKTFILMNNNVYLFCFLIFLSKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKK TPIHHRLYRSLPIISTIGGIIRLIEAHSGPIHPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLY CNSTFTCVQNLSFTERMLEGIGEAVNFLA >Mature_188_residues GIFCFKKINLFKTFILMNNNVYLFCFLIFLSKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKKT PIHHRLYRSLPIISTIGGIIRLIEAHSGPIHPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLYC NSTFTCVQNLSFTERMLEGIGEAVNFLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21789; Mature: 21658
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFCFKKINLFKTFILMNNNVYLFCFLIFLSKKVFFESYEDFANVASSWPKSLRALVQG CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RYFVDSELKETPYRIHDFKKTPIHHRLYRSLPIISTIGGIIRLIEAHSGPIHPRDKMKYR CHHHCCHHHHCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLYCNSTFTCVQNLSFTERMLEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH IGEAVNFLA HHHHHHHCC >Mature Secondary Structure GIFCFKKINLFKTFILMNNNVYLFCFLIFLSKKVFFESYEDFANVASSWPKSLRALVQG CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RYFVDSELKETPYRIHDFKKTPIHHRLYRSLPIISTIGGIIRLIEAHSGPIHPRDKMKYR CHHHCCHHHHCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLYCNSTFTCVQNLSFTERMLEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH IGEAVNFLA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA