| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16752795
GI number: 16752795
Start: 560728
End: 561153
Strand: Direct
Name: Not Available
Synonym: CP0519
Alternate gene names: NA
Gene position: 560728-561153 (Clockwise)
Preceding gene: 16752792
Following gene: 16752796
Centisome position: 45.59
GC content: 38.03
Gene sequence:
>426_bases ATGGCTTGTTCTATTGGTTATCATCTGTGTAATGCAAACGAGCCCGACAGATTCGTTGCGTCGAAAGTAGCTCTAGTTGC AGATATTCTTCTCTACCCTTTTATGGCGGTCATTTGTGCAGTTGTTTTTGCCGTCTTGATGGTAGTAAAACTACTGTTTT TAGCTATAAAATTCCTTGTTAATACCTGTATTGCAGCTTGTAAATCAAGGCCTCTGCCCTCGTGTAAAGAGAATTTTCAA TGCTTGTTTGGACCAAAGGATAAACCAGGTCCATCAGATTGGTTAGGATGCCTAGTACTTATTCCGATCATAGGGACCCT AATTTATAGCACGATTATTACAGTACAATCGGATACTAATCGTTTAAGATACTTTATTATATCTCCTGCTTATCAAGTGG GATCAACTGCTATTATAAATTGGTAA
Upstream 100 bases:
>100_bases TTGAACGGGGAAATAGTAAAGAATATAACTTTATTTTTTTTAATAAATAAACTATAATTATTTAGTTTTTTTATTAAAAT TTGTTAAAGGGAGGATAATA
Downstream 100 bases:
>100_bases TAACTATAGATAGGGGTTTTTCTAAGCTAGAAAGACCTCTATTTTTATATTCATGGACCAATAACAAGTAGTTTCTAATA ATTAAAAATATTTTAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MACSIGYHLCNANEPDRFVASKVALVADILLYPFMAVICAVVFAVLMVVKLLFLAIKFLVNTCIAACKSRPLPSCKENFQ CLFGPKDKPGPSDWLGCLVLIPIIGTLIYSTIITVQSDTNRLRYFIISPAYQVGSTAIINW
Sequences:
>Translated_141_residues MACSIGYHLCNANEPDRFVASKVALVADILLYPFMAVICAVVFAVLMVVKLLFLAIKFLVNTCIAACKSRPLPSCKENFQ CLFGPKDKPGPSDWLGCLVLIPIIGTLIYSTIITVQSDTNRLRYFIISPAYQVGSTAIINW >Mature_140_residues ACSIGYHLCNANEPDRFVASKVALVADILLYPFMAVICAVVFAVLMVVKLLFLAIKFLVNTCIAACKSRPLPSCKENFQC LFGPKDKPGPSDWLGCLVLIPIIGTLIYSTIITVQSDTNRLRYFIISPAYQVGSTAIINW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15492; Mature: 15361
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACSIGYHLCNANEPDRFVASKVALVADILLYPFMAVICAVVFAVLMVVKLLFLAIKFLV CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTCIAACKSRPLPSCKENFQCLFGPKDKPGPSDWLGCLVLIPIIGTLIYSTIITVQSDTN HHHHHHHHCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLRYFIISPAYQVGSTAIINW EEEEEEECCCHHHCCEEEECC >Mature Secondary Structure ACSIGYHLCNANEPDRFVASKVALVADILLYPFMAVICAVVFAVLMVVKLLFLAIKFLV CCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTCIAACKSRPLPSCKENFQCLFGPKDKPGPSDWLGCLVLIPIIGTLIYSTIITVQSDTN HHHHHHHHCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLRYFIISPAYQVGSTAIINW EEEEEEECCCHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA