| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16752707
GI number: 16752707
Start: 462846
End: 464585
Strand: Direct
Name: Not Available
Synonym: CP0426
Alternate gene names: NA
Gene position: 462846-464585 (Clockwise)
Preceding gene: 16752706
Following gene: 16752708
Centisome position: 37.63
GC content: 45.8
Gene sequence:
>1740_bases ATGGCAGTTTCAGGTGGCGGAGGGGTTCAGCCTTCTTCGGATCCAGGAAAGTGGAATCCTGCTCTGCAAGGAGAGCAGGC AGAAGGCCCGTCTCCGCTAAAAGAATCTATATTTTCTGAAACCAAGCAGGCCTCCTCTGCTGCGAAGCAGGAAAGCTTAG TGCGTTCAGGATCTACAGGAATGTATGCAACAGAATCTCAGATAAATAAGGCTAAGTATCGTAAAGCTCAAGATCGATCA TCAACCTCTCCAAAATCCAAATTGAAAGGTACATTTTCTAAAATGCGCGCTAGTGTGCAAGGATTCATGTCAGGATTCGG ATCTCGGGCTTCGAGAGTGTCAGCAAAGCGTGCTTCCGATAGTGGTGAGGGAACATCCTTATTGCCGACAGAGATGGATG TTGCTCTAAAGAAGGGAAACCGTATTTCACCTGAAATGCAGGGATTTTTCTTAGATGCTTCGGGTATGGGAGGGAGTTCC TCTGATATTTCTCAGCTTTCTTTAGAGGCTTTGAAATCTTCAGCATTTTCAGGTGCCAGGAGTTTAAGTTTAAGCTCTTC AGAATCTAGTTCCGTGGCTTCGTTTGGATCTTTCCAAAAGGCCATAGAGCCTATGAGTGAGGAGAAGGTAAATGCTTGGA CAGTGGCTCGTTTAGGAGGGGAGATGGTCAGCTCTCTTCTCGATCCCAATGTTGAGACCTCATCATTAGTGCGCAGGGCA ATGGCAACAGGCAACGAAGGCATGATAGATCTTTCTGATTTAGGACAGGAAGAGGTCAGTACAGCCATGACATCTCCCAG AGCAGTAGAAGGAAAAGTAAAGGTATCTTCTTCTGATTCTCCAGAAGCGAATCCAACAGGAATTCCAAATTCTAATACTT TAGAAAGGGCGGAAAAGGAAGCAGAGAAACAAGAAAGTCGAGAGCAGTTGAGTGAGGATCAGATGATGCTTGCACGTGCT ATGGCTGGGCTTCTTACAGGGGCAGCGCCTCAAGAGGTATTGAGTAATTCTGTTTGGTCTGGTCCTTCTACAGTATTTCC TCCTCCCAAGTTTTCAGGAACTTTACCCACCCAGAGATCGGGAGATAAATCAAAGCATAAATCTCCAGGAATAGAGAAGA GTACGAACCATACGAACTTTTCTCCTCTTCGGGAAGGTACTGTGAAGAGTGCTGAGGTTAAAAGTTTGCCTCATCCAGAA AGTATGTATCGTTTTCCTAAAGATAGCATCGTTTCCAGGGAGGAACCTGAAGCCGTTGTTAAAGAATCTACGGCATTCAA AAATCCAGAGAATAGCAGTCAAAACTTTCTCCCTATTGCTGTGGAGAGTGTTTTCCCTAAGGAAAGTGGTACGGGAGGGG CTTTAGGAAGTGATGCTGTGAGTTCCTCATATCATTTCCTTGCGCAACGTGGAGTGTCTTTACTCGCTCCTCTACCTCGT GCTACTGATGACTATAAAGAGAAGCTCGAAGCTCATAAAGGTCCTGGAGGTCCTCCAGATCCTTTGATTTATCAGTATCG AAATGTTGCTGTTGAGCCGCCAATTGTTCTCCGTTCTCCCCAGCCGTTTTCAGGATCTTCACGTCTATCGGTTCAAGGAA AGCCTGAAGCTGCTTCAGTTCATGACGATGGTGGGGGGGGAAATAGTGGTGGTTTTAGCGGAGATCAAAGAAGAGGATCT TCGGGCCAGAAAGCTTCCCGTCAGGAAAAGAAGGGAAAAAAATTATCTACGGATATTTAG
Upstream 100 bases:
>100_bases TTTAAAATTTGTTTGTAAGTTCTTTTTTTTAAATTAATTATTTTTTGTTTTAAAATTATAAGTAGTTATAAGTTTTATTT TTTAAATTCAGAGAATCATT
Downstream 100 bases:
>100_bases GGTTTTAAGTCGGTTTGATGTGATGCGTATAATTCGTTTTGATCCTTATGGTGCGCTATCTGCACAAAGCATAGCTAAAG ATTCCCGTCAAAACTCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MAVSGGGGVQPSSDPGKWNPALQGEQAEGPSPLKESIFSETKQASSAAKQESLVRSGSTGMYATESQINKAKYRKAQDRS STSPKSKLKGTFSKMRASVQGFMSGFGSRASRVSAKRASDSGEGTSLLPTEMDVALKKGNRISPEMQGFFLDASGMGGSS SDISQLSLEALKSSAFSGARSLSLSSSESSSVASFGSFQKAIEPMSEEKVNAWTVARLGGEMVSSLLDPNVETSSLVRRA MATGNEGMIDLSDLGQEEVSTAMTSPRAVEGKVKVSSSDSPEANPTGIPNSNTLERAEKEAEKQESREQLSEDQMMLARA MAGLLTGAAPQEVLSNSVWSGPSTVFPPPKFSGTLPTQRSGDKSKHKSPGIEKSTNHTNFSPLREGTVKSAEVKSLPHPE SMYRFPKDSIVSREEPEAVVKESTAFKNPENSSQNFLPIAVESVFPKESGTGGALGSDAVSSSYHFLAQRGVSLLAPLPR ATDDYKEKLEAHKGPGGPPDPLIYQYRNVAVEPPIVLRSPQPFSGSSRLSVQGKPEAASVHDDGGGGNSGGFSGDQRRGS SGQKASRQEKKGKKLSTDI
Sequences:
>Translated_579_residues MAVSGGGGVQPSSDPGKWNPALQGEQAEGPSPLKESIFSETKQASSAAKQESLVRSGSTGMYATESQINKAKYRKAQDRS STSPKSKLKGTFSKMRASVQGFMSGFGSRASRVSAKRASDSGEGTSLLPTEMDVALKKGNRISPEMQGFFLDASGMGGSS SDISQLSLEALKSSAFSGARSLSLSSSESSSVASFGSFQKAIEPMSEEKVNAWTVARLGGEMVSSLLDPNVETSSLVRRA MATGNEGMIDLSDLGQEEVSTAMTSPRAVEGKVKVSSSDSPEANPTGIPNSNTLERAEKEAEKQESREQLSEDQMMLARA MAGLLTGAAPQEVLSNSVWSGPSTVFPPPKFSGTLPTQRSGDKSKHKSPGIEKSTNHTNFSPLREGTVKSAEVKSLPHPE SMYRFPKDSIVSREEPEAVVKESTAFKNPENSSQNFLPIAVESVFPKESGTGGALGSDAVSSSYHFLAQRGVSLLAPLPR ATDDYKEKLEAHKGPGGPPDPLIYQYRNVAVEPPIVLRSPQPFSGSSRLSVQGKPEAASVHDDGGGGNSGGFSGDQRRGS SGQKASRQEKKGKKLSTDI >Mature_578_residues AVSGGGGVQPSSDPGKWNPALQGEQAEGPSPLKESIFSETKQASSAAKQESLVRSGSTGMYATESQINKAKYRKAQDRSS TSPKSKLKGTFSKMRASVQGFMSGFGSRASRVSAKRASDSGEGTSLLPTEMDVALKKGNRISPEMQGFFLDASGMGGSSS DISQLSLEALKSSAFSGARSLSLSSSESSSVASFGSFQKAIEPMSEEKVNAWTVARLGGEMVSSLLDPNVETSSLVRRAM ATGNEGMIDLSDLGQEEVSTAMTSPRAVEGKVKVSSSDSPEANPTGIPNSNTLERAEKEAEKQESREQLSEDQMMLARAM AGLLTGAAPQEVLSNSVWSGPSTVFPPPKFSGTLPTQRSGDKSKHKSPGIEKSTNHTNFSPLREGTVKSAEVKSLPHPES MYRFPKDSIVSREEPEAVVKESTAFKNPENSSQNFLPIAVESVFPKESGTGGALGSDAVSSSYHFLAQRGVSLLAPLPRA TDDYKEKLEAHKGPGGPPDPLIYQYRNVAVEPPIVLRSPQPFSGSSRLSVQGKPEAASVHDDGGGGNSGGFSGDQRRGSS GQKASRQEKKGKKLSTDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61057; Mature: 60926
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSGGGGVQPSSDPGKWNPALQGEQAEGPSPLKESIFSETKQASSAAKQESLVRSGSTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MYATESQINKAKYRKAQDRSSTSPKSKLKGTFSKMRASVQGFMSGFGSRASRVSAKRASD CEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGEGTSLLPTEMDVALKKGNRISPEMQGFFLDASGMGGSSSDISQLSLEALKSSAFSGAR CCCCCEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHH SLSLSSSESSSVASFGSFQKAIEPMSEEKVNAWTVARLGGEMVSSLLDPNVETSSLVRRA HEECCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MATGNEGMIDLSDLGQEEVSTAMTSPRAVEGKVKVSSSDSPEANPTGIPNSNTLERAEKE HHCCCCCEEEHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH AEKQESREQLSEDQMMLARAMAGLLTGAAPQEVLSNSVWSGPSTVFPPPKFSGTLPTQRS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GDKSKHKSPGIEKSTNHTNFSPLREGTVKSAEVKSLPHPESMYRFPKDSIVSREEPEAVV CCCHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHCCCCHHHCCCCCCHHHH KESTAFKNPENSSQNFLPIAVESVFPKESGTGGALGSDAVSSSYHFLAQRGVSLLAPLPR HHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCC ATDDYKEKLEAHKGPGGPPDPLIYQYRNVAVEPPIVLRSPQPFSGSSRLSVQGKPEAASV CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCC HDDGGGGNSGGFSGDQRRGSSGQKASRQEKKGKKLSTDI CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure AVSGGGGVQPSSDPGKWNPALQGEQAEGPSPLKESIFSETKQASSAAKQESLVRSGSTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MYATESQINKAKYRKAQDRSSTSPKSKLKGTFSKMRASVQGFMSGFGSRASRVSAKRASD CEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGEGTSLLPTEMDVALKKGNRISPEMQGFFLDASGMGGSSSDISQLSLEALKSSAFSGAR CCCCCEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHH SLSLSSSESSSVASFGSFQKAIEPMSEEKVNAWTVARLGGEMVSSLLDPNVETSSLVRRA HEECCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MATGNEGMIDLSDLGQEEVSTAMTSPRAVEGKVKVSSSDSPEANPTGIPNSNTLERAEKE HHCCCCCEEEHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH AEKQESREQLSEDQMMLARAMAGLLTGAAPQEVLSNSVWSGPSTVFPPPKFSGTLPTQRS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GDKSKHKSPGIEKSTNHTNFSPLREGTVKSAEVKSLPHPESMYRFPKDSIVSREEPEAVV CCCHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHCCCCHHHCCCCCCHHHH KESTAFKNPENSSQNFLPIAVESVFPKESGTGGALGSDAVSSSYHFLAQRGVSLLAPLPR HHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCC ATDDYKEKLEAHKGPGGPPDPLIYQYRNVAVEPPIVLRSPQPFSGSSRLSVQGKPEAASV CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCC HDDGGGGNSGGFSGDQRRGSSGQKASRQEKKGKKLSTDI CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA