Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752624

GI number: 16752624

Start: 379765

End: 380979

Strand: Direct

Name: Not Available

Synonym: CP0339

Alternate gene names: NA

Gene position: 379765-380979 (Clockwise)

Preceding gene: 16752623

Following gene: 16752625

Centisome position: 30.88

GC content: 42.55

Gene sequence:

>1215_bases
ATGGGGCTGCAATCCAGGTTACAACATTGTATAGAAGTGTCCCAGAATTCGAACTTTGATTCACAAGTAAAACAGTTTAT
CTATGCGTGCCAAGATAAGACATTAAGGCAGTCTGTACTCAAGATTTTCCGCTACCATCCTTTACTAAAAATTCATGATA
TTGCTCGGGCCGTCTATCTTTTGATGGCCTTAGAAGAAGGCGAGGATTTAGGCTTAAGCTTTTTAAATGTACAGCAGTAC
CCTTCAGGTGCTGTAGAACTGTTTTCTTGTGGGGGATTTCCTTGGAAAGGATTACCTTATCCTGCAGAACATGCGGAATT
TGGCCTACTCCTGTTACAGATCGCAGAGTTTTATGAAGAGAGTCAGGCATACGTCTCTAAAATGAGTCATTTTCAACAGG
CACTCTTTGATCACCAAGGGAGCGTCTTTCCCTCTCTCTGGAGCCAGGAGAACTCTCGACTCCTAAAAGAAAAGACAACT
CTTAGCCAATCGTTTCTCTTCCAATTAGGAATGCAAATTCACCCAGAATACAGTCTTGAGGATCCTGCACTAGGGTTCTG
GATGCAAAGAACGCGTTCTTCATCCGCTTTTGTAGCCGCTTCAGGATGTCAAAGTAGCTTGGGAGCGTATTCCTCAGGGG
ATGTCGGTGTTATCGCTTATGGACCTTGCTCTGGAGACATTAGTGATTGTTATTATTTTGGATGTTGTGGAATCGCTAAA
GAGTTCGTGTGCCAAAAATCTCACCAAACTACAGAGATTTCTTTTCTCACCTCTACAGGAAAGCCTCATCCCAGAAATAC
GGGATTTTCCTACCTTCGAGATTCCTATGTACATCTGCCGATCCGCTGTAAGATCACTATTTCCGACAAGCAATATCGCG
TGCACGCTGCGTTGGCTGAGGCCACCTCTGCCATGACGTTTTCTATTTTCTGTAAGGGGAAGAATTGTCAGGTTGTTGAC
GGCCCTCGCTTGCGCTCCTGTTCCCTAGATTCTTATAAAGGTCCCGGAAACGACATTATGATTCTTGGGGAAAATGACGC
AATCAACATTGTTTCTGCAAGTCCCTATATGGAAATTTTTGCTTTGCAAGGCAAAGAAAAATTTTGGAATGCAGACTTTT
TGATTAATATTCCTTACAAAGAAGAGGGCGTCATGTTAATTTTTGAAAAAAAAGTGACCTCTGAGAAAGGAAGATTCTTT
ACGAAGATGAATTAA

Upstream 100 bases:

>100_bases
CAGTTGTTAGAGTCAGACCGGTTTTTTACCGGGCTTGACTCTAATTTTTGTTATTATTATCGTTTGGTGCAATGCTTTTC
TGATCAAATTGTGCGTGATA

Downstream 100 bases:

>100_bases
TTTTGGGTCTGTAATTGTGTTTAAGAATTGTTTGTATTAAAATGATTCTTTTTATACGAGGAGAGCACATTCTAATGGAA
CTTCTTCCACACGAAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAVYLLMALEEGEDLGLSFLNVQQY
PSGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDHQGSVFPSLWSQENSRLLKEKTT
LSQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVIAYGPCSGDISDCYYFGCCGIAK
EFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAALAEATSAMTFSIFCKGKNCQVVD
GPRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIPYKEEGVMLIFEKKVTSEKGRFF
TKMN

Sequences:

>Translated_404_residues
MGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAVYLLMALEEGEDLGLSFLNVQQY
PSGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDHQGSVFPSLWSQENSRLLKEKTT
LSQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVIAYGPCSGDISDCYYFGCCGIAK
EFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAALAEATSAMTFSIFCKGKNCQVVD
GPRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIPYKEEGVMLIFEKKVTSEKGRFF
TKMN
>Mature_403_residues
GLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAVYLLMALEEGEDLGLSFLNVQQYP
SGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDHQGSVFPSLWSQENSRLLKEKTTL
SQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVIAYGPCSGDISDCYYFGCCGIAKE
FVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAALAEATSAMTFSIFCKGKNCQVVDG
PRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIPYKEEGVMLIFEKKVTSEKGRFFT
KMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45398; Mature: 45267

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAVYL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMALEEGEDLGLSFLNVQQYPSGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEE
HHHHCCCCCCCEEEEEHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SQAYVSKMSHFQQALFDHQGSVFPSLWSQENSRLLKEKTTLSQSFLFQLGMQIHPEYSLE
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
DPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVIAYGPCSGDISDCYYFGCCGIAK
CCHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
EFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAALAE
HHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCEEEEEEEEEEEECCCCEEEHHHHHH
ATSAMTFSIFCKGKNCQVVDGPRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIF
HHCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEE
ALQGKEKFWNADFLINIPYKEEGVMLIFEKKVTSEKGRFFTKMN
EECCCCCEECCCEEEECCCCCCCEEEEEECCCCCCCCCEEEECC
>Mature Secondary Structure 
GLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAVYL
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMALEEGEDLGLSFLNVQQYPSGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEE
HHHHCCCCCCCEEEEEHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SQAYVSKMSHFQQALFDHQGSVFPSLWSQENSRLLKEKTTLSQSFLFQLGMQIHPEYSLE
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
DPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVIAYGPCSGDISDCYYFGCCGIAK
CCHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
EFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAALAE
HHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCEEEEEEEEEEEECCCCEEEHHHHHH
ATSAMTFSIFCKGKNCQVVDGPRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIF
HHCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEE
ALQGKEKFWNADFLINIPYKEEGVMLIFEKKVTSEKGRFFTKMN
EECCCCCEECCCEEEECCCCCCCEEEEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA