| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752592
GI number: 16752592
Start: 336779
End: 337894
Strand: Direct
Name: Not Available
Synonym: CP0305
Alternate gene names: 16752592
Gene position: 336779-337894 (Clockwise)
Preceding gene: 16752590
Following gene: 16752601
Centisome position: 27.38
GC content: 40.77
Gene sequence:
>1116_bases ATGGAAATGATGAGCCCATTCCAACAACCTGAGCAATGTCATTTTGATGTTGTGGGAAGTTTCTTACGTCCTGAAAGTCT TACACGAGCACGCTCTGATTTTGAAGAAGGAAGAATTGTCTATGAGCAGATGCGAGTTGTCGAAGATGCTGCTATTCGTA ATCTCATAAAAAAGCAAACAGAAGCAGGTCTTATCTTTTTTACTGATGGGGAATTCCGTAGGTATAGTTGGGATTTCGAC TTTATGTGGGGATTCCATGGCGTGGATCGTCGCAGGGACTCTAATGACCCTGAAATTGGAGTGTATCTTAAAGATAAAAT CTCCGTATCAAAACATCCGTTTATAGAACATTTCGAGTTTGTCAAAACTTTTGAGAAGGGAAATGCAAAAGCAAAACAAA CGATTCCTTCTCCATCACAATTTTTCCATGAGATGATTTTTGCTCCTAATCTGAAAAATACTCGGAAGTTTTATCCTACG AATCAAGAGCTAATTGATGATATTGTCTTTTATTATCGCCAAGTCATCCAAGATCTTTATGCTGCAGGTTGTCGTAATTT GCAGTTGGACGATTGTGCTTGGTGTCGCCTCTTGGATATACGAGCGCCTTCTTGGTATGGTGTTGATTCTCATGACAGGT TGCAGGAAATTTTAGAACAGTTTTTATGGATCCATAATTTAGTGATGAAGGATAGACCCGAGGATCTTTTTGTAAGTCTG CATGTCTGTCGTGGTGATTATCAGGCCGAGTTTTTCTCTAGACGAGCTTATGATTCTATAGAGGAGCCTTTATTTGCTAA GACCGATGTGGATAGTTATCACTATTATTGGGCTCTTGATGATAAGTATTCAGGAGGTGCTGAGCCTTTAGCTTACGTCT CTGGAGAGAAACACGTCTGCTTGGGATTGATCTCCAGCAACCATTCTTGTATTGAAGATCGAGATGCTGTGGTTTCTCGT ATTTATGAAGCTGCGAGCTACATTCCCTTAGAGAGACTTTCTTTGAGCCCGCAATGTGGGTTTGCTTCTTGTGAGGGAGA CCATAGAATGACTGAAGAAGAACAGTGGAAGAAGATCGCCTTTGTGAAAGAGATTGCTAAAGAGATCTGGGGATAA
Upstream 100 bases:
>100_bases TTATGTTTTGATCTAGCTGTTTTCTTGTCTTTAATTTATTCAACCATCGAGAAGAGAGATCCATGAGTGGAAATGTATTT TATTAGGATCATCTCTAAGG
Downstream 100 bases:
>100_bases AGAATCCGGAGTTTTTATCGACTCTAAGAGTTTTCGGATCATAGAAAACATTTAAATATTCAAGAGTCTTTGGCTATTGG ATCATAGACAGTCTTAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MEMMSPFQQPEQCHFDVVGSFLRPESLTRARSDFEEGRIVYEQMRVVEDAAIRNLIKKQTEAGLIFFTDGEFRRYSWDFD FMWGFHGVDRRRDSNDPEIGVYLKDKISVSKHPFIEHFEFVKTFEKGNAKAKQTIPSPSQFFHEMIFAPNLKNTRKFYPT NQELIDDIVFYYRQVIQDLYAAGCRNLQLDDCAWCRLLDIRAPSWYGVDSHDRLQEILEQFLWIHNLVMKDRPEDLFVSL HVCRGDYQAEFFSRRAYDSIEEPLFAKTDVDSYHYYWALDDKYSGGAEPLAYVSGEKHVCLGLISSNHSCIEDRDAVVSR IYEAASYIPLERLSLSPQCGFASCEGDHRMTEEEQWKKIAFVKEIAKEIWG
Sequences:
>Translated_371_residues MEMMSPFQQPEQCHFDVVGSFLRPESLTRARSDFEEGRIVYEQMRVVEDAAIRNLIKKQTEAGLIFFTDGEFRRYSWDFD FMWGFHGVDRRRDSNDPEIGVYLKDKISVSKHPFIEHFEFVKTFEKGNAKAKQTIPSPSQFFHEMIFAPNLKNTRKFYPT NQELIDDIVFYYRQVIQDLYAAGCRNLQLDDCAWCRLLDIRAPSWYGVDSHDRLQEILEQFLWIHNLVMKDRPEDLFVSL HVCRGDYQAEFFSRRAYDSIEEPLFAKTDVDSYHYYWALDDKYSGGAEPLAYVSGEKHVCLGLISSNHSCIEDRDAVVSR IYEAASYIPLERLSLSPQCGFASCEGDHRMTEEEQWKKIAFVKEIAKEIWG >Mature_371_residues MEMMSPFQQPEQCHFDVVGSFLRPESLTRARSDFEEGRIVYEQMRVVEDAAIRNLIKKQTEAGLIFFTDGEFRRYSWDFD FMWGFHGVDRRRDSNDPEIGVYLKDKISVSKHPFIEHFEFVKTFEKGNAKAKQTIPSPSQFFHEMIFAPNLKNTRKFYPT NQELIDDIVFYYRQVIQDLYAAGCRNLQLDDCAWCRLLDIRAPSWYGVDSHDRLQEILEQFLWIHNLVMKDRPEDLFVSL HVCRGDYQAEFFSRRAYDSIEEPLFAKTDVDSYHYYWALDDKYSGGAEPLAYVSGEKHVCLGLISSNHSCIEDRDAVVSR IYEAASYIPLERLSLSPQCGFASCEGDHRMTEEEQWKKIAFVKEIAKEIWG
Specific function: Unknown
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxjH [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002629 [H]
Pfam domain/function: PF01717 Meth_synt_2 [H]
EC number: NA
Molecular weight: Translated: 43537; Mature: 43537
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMMSPFQQPEQCHFDVVGSFLRPESLTRARSDFEEGRIVYEQMRVVEDAAIRNLIKKQT CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH EAGLIFFTDGEFRRYSWDFDFMWGFHGVDRRRDSNDPEIGVYLKDKISVSKHPFIEHFEF CCCEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH VKTFEKGNAKAKQTIPSPSQFFHEMIFAPNLKNTRKFYPTNQELIDDIVFYYRQVIQDLY HHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AAGCRNLQLDDCAWCRLLDIRAPSWYGVDSHDRLQEILEQFLWIHNLVMKDRPEDLFVSL HHCCCCCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEE HVCRGDYQAEFFSRRAYDSIEEPLFAKTDVDSYHYYWALDDKYSGGAEPLAYVSGEKHVC EECCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCEEE LGLISSNHSCIEDRDAVVSRIYEAASYIPLERLSLSPQCGFASCEGDHRMTEEEQWKKIA EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH FVKEIAKEIWG HHHHHHHHHCC >Mature Secondary Structure MEMMSPFQQPEQCHFDVVGSFLRPESLTRARSDFEEGRIVYEQMRVVEDAAIRNLIKKQT CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH EAGLIFFTDGEFRRYSWDFDFMWGFHGVDRRRDSNDPEIGVYLKDKISVSKHPFIEHFEF CCCEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH VKTFEKGNAKAKQTIPSPSQFFHEMIFAPNLKNTRKFYPTNQELIDDIVFYYRQVIQDLY HHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AAGCRNLQLDDCAWCRLLDIRAPSWYGVDSHDRLQEILEQFLWIHNLVMKDRPEDLFVSL HHCCCCCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEE HVCRGDYQAEFFSRRAYDSIEEPLFAKTDVDSYHYYWALDDKYSGGAEPLAYVSGEKHVC EECCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCEEE LGLISSNHSCIEDRDAVVSRIYEAASYIPLERLSLSPQCGFASCEGDHRMTEEEQWKKIA EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH FVKEIAKEIWG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10568751 [H]