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Identifier: 16752349

GI number: 16752349

Start: 68132

End: 68902

Strand: Direct

Name: Not Available

Synonym: CP0055

Alternate gene names: 16752349

Gene position: 68132-68902 (Clockwise)

Preceding gene: 16752348

Following gene: 16752350

Centisome position: 5.54

GC content: 40.86

Gene sequence:

>771_bases
ATGTTAAAAATAAAGCACTTACATGCTAGCTGTAATGATGTGAAGATTCTGGATGATTTCAATTTGAATATCCAACCTGG
AACTATGCATGTCATTATGGGACCTAATGGGGCAGGAAAATCGACTCTTGCTAAAATTTTAGCGGGAGATGAGAGTGTCT
TGGTATCTTCGGGTGAGATTGCATTACAGGAGCAAAATTTGCTTTCTATGTTGCCAGAAGAGCGTTCCCGAGCAGGGCTA
TTTGTTGGTTTTCAAATGCCTCCAGAGATTCCTGGAGTCAATAACAAGATGTTTTTGCGAGACGCCTATAATGCCCGCCG
TCGTGCGAATCAAGAGGGAGATATTTCTATTGATGAGTTTAATACTCTGCTTTCGACTGTATTAGAGACATATGAGTATA
ACGCGACTACAGATCTATTTTTAGATAGGAATGTCAACGAGGGTTTTTCTGGAGGAGAAAGAAAGCGCAATGAGATTTGC
CAGATGCTAGTTTTAGAACCCGAAATGGTCTTACTAGATGAACCTGATTCTGGTTTGGATGTAGATGCATTACGTTTGAT
TTGTAGAGTCTTGGAGAAATACCGAGAGTTACATCCTACCAGTTCCTTATGCATTGTGACTCACAACCCCAAATTAGGAA
ACCTCATTCGCCCTGATGTTGTTCATCTTTTATTAGATGGTCGAGTAGCGCTTTCAGGAGACGTTTCTTTGATGCATGAA
TTAGAAGCAAAAAGCTACCAAGAGGTGACTAAGCGTGTTGCGTGGAGATAA

Upstream 100 bases:

>100_bases
GTTTTTGTCGGGAAATTATAGAACAATTACCTTTAGAATTTGCTCAGGAAGCATCGAAGTTATTGTTAATTAAATTAGAA
AATAGCGTGGGTTAGGTTCA

Downstream 100 bases:

>100_bases
GGTGTTAGTTTCAATAGAGACATTTTCTTCTATTGCTTCGGGTTCTCCTGTGCAAAAAGCTGCGGAAGCTTGCTACACTC
AATATAGCAAGCAGCCTTCT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MLKIKHLHASCNDVKILDDFNLNIQPGTMHVIMGPNGAGKSTLAKILAGDESVLVSSGEIALQEQNLLSMLPEERSRAGL
FVGFQMPPEIPGVNNKMFLRDAYNARRRANQEGDISIDEFNTLLSTVLETYEYNATTDLFLDRNVNEGFSGGERKRNEIC
QMLVLEPEMVLLDEPDSGLDVDALRLICRVLEKYRELHPTSSLCIVTHNPKLGNLIRPDVVHLLLDGRVALSGDVSLMHE
LEAKSYQEVTKRVAWR

Sequences:

>Translated_256_residues
MLKIKHLHASCNDVKILDDFNLNIQPGTMHVIMGPNGAGKSTLAKILAGDESVLVSSGEIALQEQNLLSMLPEERSRAGL
FVGFQMPPEIPGVNNKMFLRDAYNARRRANQEGDISIDEFNTLLSTVLETYEYNATTDLFLDRNVNEGFSGGERKRNEIC
QMLVLEPEMVLLDEPDSGLDVDALRLICRVLEKYRELHPTSSLCIVTHNPKLGNLIRPDVVHLLLDGRVALSGDVSLMHE
LEAKSYQEVTKRVAWR
>Mature_256_residues
MLKIKHLHASCNDVKILDDFNLNIQPGTMHVIMGPNGAGKSTLAKILAGDESVLVSSGEIALQEQNLLSMLPEERSRAGL
FVGFQMPPEIPGVNNKMFLRDAYNARRRANQEGDISIDEFNTLLSTVLETYEYNATTDLFLDRNVNEGFSGGERKRNEIC
QMLVLEPEMVLLDEPDSGLDVDALRLICRVLEKYRELHPTSSLCIVTHNPKLGNLIRPDVVHLLLDGRVALSGDVSLMHE
LEAKSYQEVTKRVAWR

Specific function: Has low ATPase activity. The SufBCD complex acts synergistically with SufE to stimulate the cysteine desulfurase activity of SufS. The SufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May f

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=252, Percent_Identity=44.047619047619, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1790467, Length=234, Percent_Identity=29.4871794871795, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788761, Length=209, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87082267, Length=210, Percent_Identity=30.4761904761905, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=26.1802575107296, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789593, Length=196, Percent_Identity=25.5102040816327, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081791, Length=180, Percent_Identity=28.3333333333333, Blast_Score=61, Evalue=7e-11,
Organism=Drosophila melanogaster, GI45552199, Length=236, Percent_Identity=30.5084745762712, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24581407, Length=236, Percent_Identity=30.5084745762712, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28654; Mature: 28654

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIKHLHASCNDVKILDDFNLNIQPGTMHVIMGPNGAGKSTLAKILAGDESVLVSSGEI
CCEEEEECCCCCCEEEEECCCCEECCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCE
ALQEQNLLSMLPEERSRAGLFVGFQMPPEIPGVNNKMFLRDAYNARRRANQEGDISIDEF
EEEHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCCCCEEHHHH
NTLLSTVLETYEYNATTDLFLDRNVNEGFSGGERKRNEICQMLVLEPEMVLLDEPDSGLD
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHEECCCEEEEECCCCCCC
VDALRLICRVLEKYRELHPTSSLCIVTHNPKLGNLIRPDVVHLLLDGRVALSGDVSLMHE
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHH
LEAKSYQEVTKRVAWR
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKIKHLHASCNDVKILDDFNLNIQPGTMHVIMGPNGAGKSTLAKILAGDESVLVSSGEI
CCEEEEECCCCCCEEEEECCCCEECCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCE
ALQEQNLLSMLPEERSRAGLFVGFQMPPEIPGVNNKMFLRDAYNARRRANQEGDISIDEF
EEEHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCCCCEEHHHH
NTLLSTVLETYEYNATTDLFLDRNVNEGFSGGERKRNEICQMLVLEPEMVLLDEPDSGLD
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHEECCCEEEEECCCCCCC
VDALRLICRVLEKYRELHPTSSLCIVTHNPKLGNLIRPDVVHLLLDGRVALSGDVSLMHE
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHH
LEAKSYQEVTKRVAWR
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]