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Identifier: 16752336

GI number: 16752336

Start: 49264

End: 50379

Strand: Direct

Name: Not Available

Synonym: CP0042

Alternate gene names: NA

Gene position: 49264-50379 (Clockwise)

Preceding gene: 16752335

Following gene: 16752337

Centisome position: 4.01

GC content: 42.11

Gene sequence:

>1116_bases
ATGGCAGTAGCAGCCGATTCTAGTGCAAGTTGGCTAAAATCTCGGAATAATTTTTTAAGTTCCCTAGGGAAGACTGAGGA
GCAGGTTGCTGCTCCTGAGTTTCCTAAGGAACTGTGCCAACATAAAATTAGAGAGAAATTTCGACTTGAAGATGTCCAGG
TTTCTATAAAGTTTCGTGGATCTATAACTGCTGTAGAAGCTACGAAAGAATTCGGCGTGCATCTTCTAATACAACCTATG
GTAGTCCAACCTTGGGAAGTAGAAAATCTGTTGTTCCTAACATCAGAAGAAGACCTTCAGGAGCTCATGGTAGCAGTATT
TGATGATGCCAGCCTTGCTTCATATTTCTATGAAAAAGATAAGCTCCTAGGGTTCCATTATTATTTTGTCGCCGAAGCCT
GTAAATTATTTGAAGAGCTCCAGTGGGTGCCCTCTTTGTCTGCCAAAGTCGGAGGGGATGCTATATTTACAGCTACAAGT
CTGCAAGGCTCTTTCCAAGTCGTAGATATTTCTCTGCGCCTAGATGGAAAAAATGTTCGATGTCGTCTGTTATTGCCAGA
AGATACCTTCCAAAGTTGTCAGAAGTTTTTCTCAGGTCTCCATGATGAGTCGGATCTTCATAATATAGATCAAACGCAGC
AGATCTCTCTTTCTGTAGAAGTCGGGTATTCTCAGCTAACTCAAGAAGAATGGCATCAGGTAGTCCCAGGATCATTCATT
ATGTTAGATAGCTGTCTTTATGATCCTGAAACCGAAGAAAGCGGCGCTTTACTCACAGTGCAAAAACATCAGTTTTTTGG
TGGCCGTTTCTTAACGCCCTCCTCTGGAGAATTTAAAATTACCAGTTACCCTAACCTAACTCATGAAGACCCTCCTCTTC
CTGAAAATCCACAAGCTTCCGCAGCTCCCCTCCCTGGATACAGTAGACTCGTAGTCGAAGTTGCAAGATATTCCTTAGCA
GTCAGTGAATTTATAAAATTGAACTTGGGAAGTATATTGAGCTTGGGAAACCATCCAGCATACGGTGTGGATATCATTTT
AGATGGAGCTAAGGTCGGTAGGGGAGAAATTATCGCTCTAGGAGATGTTTTAGGTATTCGCGTTTTAGAGGTATAA

Upstream 100 bases:

>100_bases
AGAAGAGAAAGATCAAAGAGATCAGAATCAAAAACAAAAACAAGACGATAAAGAACAAGATTCTTATAAAATCGAAGAAG
CACGTTTATAAAGGTACTTT

Downstream 100 bases:

>100_bases
AGAAAGATTGGATTTATGGATTGTCGTGGTGGCATCCCTCTTCCTGAACCTCAGGTGATTGGCGGATATCATGTTAAAAA
AATATTGAGTAAAAAATTAA

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MAVAADSSASWLKSRNNFLSSLGKTEEQVAAPEFPKELCQHKIREKFRLEDVQVSIKFRGSITAVEATKEFGVHLLIQPM
VVQPWEVENLLFLTSEEDLQELMVAVFDDASLASYFYEKDKLLGFHYYFVAEACKLFEELQWVPSLSAKVGGDAIFTATS
LQGSFQVVDISLRLDGKNVRCRLLLPEDTFQSCQKFFSGLHDESDLHNIDQTQQISLSVEVGYSQLTQEEWHQVVPGSFI
MLDSCLYDPETEESGALLTVQKHQFFGGRFLTPSSGEFKITSYPNLTHEDPPLPENPQASAAPLPGYSRLVVEVARYSLA
VSEFIKLNLGSILSLGNHPAYGVDIILDGAKVGRGEIIALGDVLGIRVLEV

Sequences:

>Translated_371_residues
MAVAADSSASWLKSRNNFLSSLGKTEEQVAAPEFPKELCQHKIREKFRLEDVQVSIKFRGSITAVEATKEFGVHLLIQPM
VVQPWEVENLLFLTSEEDLQELMVAVFDDASLASYFYEKDKLLGFHYYFVAEACKLFEELQWVPSLSAKVGGDAIFTATS
LQGSFQVVDISLRLDGKNVRCRLLLPEDTFQSCQKFFSGLHDESDLHNIDQTQQISLSVEVGYSQLTQEEWHQVVPGSFI
MLDSCLYDPETEESGALLTVQKHQFFGGRFLTPSSGEFKITSYPNLTHEDPPLPENPQASAAPLPGYSRLVVEVARYSLA
VSEFIKLNLGSILSLGNHPAYGVDIILDGAKVGRGEIIALGDVLGIRVLEV
>Mature_370_residues
AVAADSSASWLKSRNNFLSSLGKTEEQVAAPEFPKELCQHKIREKFRLEDVQVSIKFRGSITAVEATKEFGVHLLIQPMV
VQPWEVENLLFLTSEEDLQELMVAVFDDASLASYFYEKDKLLGFHYYFVAEACKLFEELQWVPSLSAKVGGDAIFTATSL
QGSFQVVDISLRLDGKNVRCRLLLPEDTFQSCQKFFSGLHDESDLHNIDQTQQISLSVEVGYSQLTQEEWHQVVPGSFIM
LDSCLYDPETEESGALLTVQKHQFFGGRFLTPSSGEFKITSYPNLTHEDPPLPENPQASAAPLPGYSRLVVEVARYSLAV
SEFIKLNLGSILSLGNHPAYGVDIILDGAKVGRGEIIALGDVLGIRVLEV

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41244; Mature: 41113

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAADSSASWLKSRNNFLSSLGKTEEQVAAPEFPKELCQHKIREKFRLEDVQVSIKFRG
CCEECCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCEEEEEEEEEECC
SITAVEATKEFGVHLLIQPMVVQPWEVENLLFLTSEEDLQELMVAVFDDASLASYFYEKD
CEEEEECHHHCCEEEEEECEEECCCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHC
KLLGFHYYFVAEACKLFEELQWVPSLSAKVGGDAIFTATSLQGSFQVVDISLRLDGKNVR
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEE
CRLLLPEDTFQSCQKFFSGLHDESDLHNIDQTQQISLSVEVGYSQLTQEEWHQVVPGSFI
EEEECCCHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEEECCHHHHCHHHHHHHCCCCEE
MLDSCLYDPETEESGALLTVQKHQFFGGRFLTPSSGEFKITSYPNLTHEDPPLPENPQAS
EEEHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCC
AAPLPGYSRLVVEVARYSLAVSEFIKLNLGSILSLGNHPAYGVDIILDGAKVGRGEIIAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEE
GDVLGIRVLEV
ECEECEEEECC
>Mature Secondary Structure 
AVAADSSASWLKSRNNFLSSLGKTEEQVAAPEFPKELCQHKIREKFRLEDVQVSIKFRG
CEECCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCEEEEEEEEEECC
SITAVEATKEFGVHLLIQPMVVQPWEVENLLFLTSEEDLQELMVAVFDDASLASYFYEKD
CEEEEECHHHCCEEEEEECEEECCCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHC
KLLGFHYYFVAEACKLFEELQWVPSLSAKVGGDAIFTATSLQGSFQVVDISLRLDGKNVR
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEE
CRLLLPEDTFQSCQKFFSGLHDESDLHNIDQTQQISLSVEVGYSQLTQEEWHQVVPGSFI
EEEECCCHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEEECCHHHHCHHHHHHHCCCCEE
MLDSCLYDPETEESGALLTVQKHQFFGGRFLTPSSGEFKITSYPNLTHEDPPLPENPQAS
EEEHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCC
AAPLPGYSRLVVEVARYSLAVSEFIKLNLGSILSLGNHPAYGVDIILDGAKVGRGEIIAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEE
GDVLGIRVLEV
ECEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA