Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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The map label for this gene is Not Available

Identifier: 16752328

GI number: 16752328

Start: 42270

End: 44807

Strand: Direct

Name: Not Available

Synonym: CP0034

Alternate gene names: NA

Gene position: 42270-44807 (Clockwise)

Preceding gene: 16752327

Following gene: 16752329

Centisome position: 3.44

GC content: 39.99

Gene sequence:

>2538_bases
ATGGCAGTACGATTAATTGTTGATGAAGGCCCCTTGTCTGGTGTAATTTTTGTTCTGGAAGATGGGATAAGCTGGTCTAT
AGGACGCGACTCTAGTGCTAATGACATTCCTATTGAAGATCCTAAACTCGGTGCATCGCAAGCCATTATCAATAAGACTG
ACGGAAGCTACTACATCACAAATTTAGATGATACAATTCCTATTGTTGTAAATGGCGTAGCGATCCAAGAAACTACACAG
TTAAAAAATGAAGATACTATCTTATTAGGAAGCAATCAGTATTCTTTCTTATCAGATGAATTTGATCCTCAAGATCTTGT
TTATGATTTTGATATTCCCGAAGAAAATTTTTCTAATGATTCAGGGGATTTGTCCGATAGTAATGAACAGGGAAAAGATC
TTGAGCCTCGGCAAACTTCGGAAACAAATCATTCACCGAAGCCTAAGGAAAAGCTGACCAAAGATCAGGGAAGTAGCGAT
CCAATTACAAGTGGGGATCAGGAGCTTGCTGATGCTTTTTTAGCATCAGCAAAAGCGGAAAAAAATCAACCAAGAGCCAA
AGTTGCTAAGAAGGGTTTAAAAGAATCTTCAAACGAGTCTTTGAATCCAAAGGAACAAAATGCAAAGGATTCTCCGAAAG
GAGAGGAAAGAACCAACAAACCCCAGAACGCCATTATGGAAGATAACGGAGCTTCGCCTAGGCAAGATCCGCAACCAAAG
TCAGCAGAACCCTCTCTTAAAAACACAGCCAGGGATGAGACTCCCTTGAAAGAAAATAAACCTGTAGAAGAGAAGGCTAA
TAAGAAAGCAACACCGGATTCTCCAGAAAAAAAAGATCAACCTGAGGAAGGTTCTAAAAAGGAAGGCTCTAAAATAGAAG
CAACACCTTTGGATTCACAAAAAGAATCCGAGGATAAGGAAGCAGAAGAAGCCTTTGTACAAGAAGAAGAAGAGAACCTT
ACGGAAGATAATAAAGAAGATTCTGACAGTGCCGCTGATGCAAATGACGACACGGCAAGTGACCATACTGCAGAGGATAA
CAAAGAAACTCCTAAAAAAGTCGAGAACGAAAAGAGCGCAGTTCTATCCCCATTTCATGTTCAAGACTTATTTCGATTCG
ATCAAACAATTTTTCCAGCAGAGATTGATGATATTGCGAAAAAAAATATCTCTGTAGACTTGACGCAGCCTTCTCGTTTT
TTACTCAAAGTTTTAGCCGGAGCTAATATTGGAGCAGAGTTCCATTTAGACTCAGGAAAAACCTATATTTTAGGTACGGA
TCCTACAACTTGTGACATAGTATTTAATGACTTAAGTGTTTCTCATCAACATGCTAAAATTACTGTCGGTAATGACGGGG
GCATTCTTATCGAGGATCTCGATAGTAAAAACGGTGTCATTGTTGAAGGACGAAAAATTGATAAGACCTCTACATTGAGC
TCGAATCAAGTTGTGGCTTTAGGAACGACATTATTTTTACTTATAGATCATCATGCCCCCGCTGATACTATAGTTGCTTC
TCTATCCCCAGACGATTACAGTTTGTTTGGGAGACAGCAAGACGCCGAAGCCTTAGAAAGACAAGAGGCCCAAGAAGAAG
AAGAAAAACAAAAACGCGCTACACTACCCGCAGGATCTTTCATTCTTACCCTGTTTGTTGGAGGATTGGCTATTCTCTTT
GGTATAGGAACAGCTTCTCTTTTCCATACCAAAGAAGTGGTTCCTTTAGAAAATATTGATTATCAAGAAGATCTTGCCCA
GGTTATCAATCAGTTCCCTACGGTGCGTTATACGTTTAATAAAACGAACAGCCAACTTTTCTTAATCGGACATGTCAAAA
ATAGTACGGACAAAAGCGAGCTGCTGTATAAAGTAGACGCCCTTTCCTTTGTGAAATCCGTAGATGATAATGTTATTGAT
GATGAAGCTGTTTGGCAGGAGATGAACATCCTGTTATCAAAGCGACCCGAGTTTAAAGGCATCAGCATGCATTCCCCAGA
ACCTGGGAAATTCATCATCACAGGCTATGTCAAGACTGAGGAGCAAGCAGCTTGCCTCGTTGATTATTTAAATATACATT
TTAATTACCTCTCGTTACTAGAGAATAAAGTTGTTGTTGAAACCCAGATGTTAAAAGCAATTGCAGGCCATCTTCTTCAA
GGAGGTTTTGCAAACATCCATGTGGCCTTTGTGAACGGTGAAGTTATCCTTACTGGTTACGTCAATAACGATGATGCAGA
GAAGTTCCGTGCTGTAGTGCAAGAGCTGTCGGGGATTCCTGGTGTGAGGTTGGTCAAGAATTTTGCTGTCTTACTCCCAG
CTGAAGAGGGAATCATAGATTTAAACCTACGTTACCCCAATCGCTATCGTGTTACAGGCTATTCTAGATACGGAGAAATA
AGTATCAATGTAGTTGTCAATGGCAGAATCCTCACAAGAGGGGACGTGATTGATGGTATGACAGTAACAAGTATACAACC
TAACGCGATCTTTTTAGAGAAGGAAGGGTTGAAATATAAAATAGACTACAATAAATAA

Upstream 100 bases:

>100_bases
ACATATGATGATTTTGTACGACATGTTGAGAGTTTTATGAATTTTTCAGAGACATGGCTGTCAGATCTTGGCCTAGGTAA
ACAGTAACAAGGTGGAATAA

Downstream 100 bases:

>100_bases
CCAAGTATTGGGGTTTATTAATTATTTATATTTAGGTAGATATTCTATGTTTAATATGGAAAATACAGCGAAAGAAGAAA
AAAATTCTCAACCGCTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Secretion System Protein SctD; Adenylate Cyclase

Number of amino acids: Translated: 845; Mature: 844

Protein sequence:

>845_residues
MAVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYITNLDDTIPIVVNGVAIQETTQ
LKNEDTILLGSNQYSFLSDEFDPQDLVYDFDIPEENFSNDSGDLSDSNEQGKDLEPRQTSETNHSPKPKEKLTKDQGSSD
PITSGDQELADAFLASAKAEKNQPRAKVAKKGLKESSNESLNPKEQNAKDSPKGEERTNKPQNAIMEDNGASPRQDPQPK
SAEPSLKNTARDETPLKENKPVEEKANKKATPDSPEKKDQPEEGSKKEGSKIEATPLDSQKESEDKEAEEAFVQEEEENL
TEDNKEDSDSAADANDDTASDHTAEDNKETPKKVENEKSAVLSPFHVQDLFRFDQTIFPAEIDDIAKKNISVDLTQPSRF
LLKVLAGANIGAEFHLDSGKTYILGTDPTTCDIVFNDLSVSHQHAKITVGNDGGILIEDLDSKNGVIVEGRKIDKTSTLS
SNQVVALGTTLFLLIDHHAPADTIVASLSPDDYSLFGRQQDAEALERQEAQEEEEKQKRATLPAGSFILTLFVGGLAILF
GIGTASLFHTKEVVPLENIDYQEDLAQVINQFPTVRYTFNKTNSQLFLIGHVKNSTDKSELLYKVDALSFVKSVDDNVID
DEAVWQEMNILLSKRPEFKGISMHSPEPGKFIITGYVKTEEQAACLVDYLNIHFNYLSLLENKVVVETQMLKAIAGHLLQ
GGFANIHVAFVNGEVILTGYVNNDDAEKFRAVVQELSGIPGVRLVKNFAVLLPAEEGIIDLNLRYPNRYRVTGYSRYGEI
SINVVVNGRILTRGDVIDGMTVTSIQPNAIFLEKEGLKYKIDYNK

Sequences:

>Translated_845_residues
MAVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYITNLDDTIPIVVNGVAIQETTQ
LKNEDTILLGSNQYSFLSDEFDPQDLVYDFDIPEENFSNDSGDLSDSNEQGKDLEPRQTSETNHSPKPKEKLTKDQGSSD
PITSGDQELADAFLASAKAEKNQPRAKVAKKGLKESSNESLNPKEQNAKDSPKGEERTNKPQNAIMEDNGASPRQDPQPK
SAEPSLKNTARDETPLKENKPVEEKANKKATPDSPEKKDQPEEGSKKEGSKIEATPLDSQKESEDKEAEEAFVQEEEENL
TEDNKEDSDSAADANDDTASDHTAEDNKETPKKVENEKSAVLSPFHVQDLFRFDQTIFPAEIDDIAKKNISVDLTQPSRF
LLKVLAGANIGAEFHLDSGKTYILGTDPTTCDIVFNDLSVSHQHAKITVGNDGGILIEDLDSKNGVIVEGRKIDKTSTLS
SNQVVALGTTLFLLIDHHAPADTIVASLSPDDYSLFGRQQDAEALERQEAQEEEEKQKRATLPAGSFILTLFVGGLAILF
GIGTASLFHTKEVVPLENIDYQEDLAQVINQFPTVRYTFNKTNSQLFLIGHVKNSTDKSELLYKVDALSFVKSVDDNVID
DEAVWQEMNILLSKRPEFKGISMHSPEPGKFIITGYVKTEEQAACLVDYLNIHFNYLSLLENKVVVETQMLKAIAGHLLQ
GGFANIHVAFVNGEVILTGYVNNDDAEKFRAVVQELSGIPGVRLVKNFAVLLPAEEGIIDLNLRYPNRYRVTGYSRYGEI
SINVVVNGRILTRGDVIDGMTVTSIQPNAIFLEKEGLKYKIDYNK
>Mature_844_residues
AVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYITNLDDTIPIVVNGVAIQETTQL
KNEDTILLGSNQYSFLSDEFDPQDLVYDFDIPEENFSNDSGDLSDSNEQGKDLEPRQTSETNHSPKPKEKLTKDQGSSDP
ITSGDQELADAFLASAKAEKNQPRAKVAKKGLKESSNESLNPKEQNAKDSPKGEERTNKPQNAIMEDNGASPRQDPQPKS
AEPSLKNTARDETPLKENKPVEEKANKKATPDSPEKKDQPEEGSKKEGSKIEATPLDSQKESEDKEAEEAFVQEEEENLT
EDNKEDSDSAADANDDTASDHTAEDNKETPKKVENEKSAVLSPFHVQDLFRFDQTIFPAEIDDIAKKNISVDLTQPSRFL
LKVLAGANIGAEFHLDSGKTYILGTDPTTCDIVFNDLSVSHQHAKITVGNDGGILIEDLDSKNGVIVEGRKIDKTSTLSS
NQVVALGTTLFLLIDHHAPADTIVASLSPDDYSLFGRQQDAEALERQEAQEEEEKQKRATLPAGSFILTLFVGGLAILFG
IGTASLFHTKEVVPLENIDYQEDLAQVINQFPTVRYTFNKTNSQLFLIGHVKNSTDKSELLYKVDALSFVKSVDDNVIDD
EAVWQEMNILLSKRPEFKGISMHSPEPGKFIITGYVKTEEQAACLVDYLNIHFNYLSLLENKVVVETQMLKAIAGHLLQG
GFANIHVAFVNGEVILTGYVNNDDAEKFRAVVQELSGIPGVRLVKNFAVLLPAEEGIIDLNLRYPNRYRVTGYSRYGEIS
INVVVNGRILTRGDVIDGMTVTSIQPNAIFLEKEGLKYKIDYNK

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93156; Mature: 93025

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS50914 BON ; PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYIT
CEEEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHEEECCCCCEEEE
NLDDTIPIVVNGVAIQETTQLKNEDTILLGSNQYSFLSDEFDPQDLVYDFDIPEENFSND
CCCCCCEEEEECEEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SGDLSDSNEQGKDLEPRQTSETNHSPKPKEKLTKDQGSSDPITSGDQELADAFLASAKAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
KNQPRAKVAKKGLKESSNESLNPKEQNAKDSPKGEERTNKPQNAIMEDNGASPRQDPQPK
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEECCCCCCCCCCCCCC
SAEPSLKNTARDETPLKENKPVEEKANKKATPDSPEKKDQPEEGSKKEGSKIEATPLDSQ
CCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
KESEDKEAEEAFVQEEEENLTEDNKEDSDSAADANDDTASDHTAEDNKETPKKVENEKSA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
VLSPFHVQDLFRFDQTIFPAEIDDIAKKNISVDLTQPSRFLLKVLAGANIGAEFHLDSGK
HCCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEEECCCC
TYILGTDPTTCDIVFNDLSVSHQHAKITVGNDGGILIEDLDSKNGVIVEGRKIDKTSTLS
EEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCC
SNQVVALGTTLFLLIDHHAPADTIVASLSPDDYSLFGRQQDAEALERQEAQEEEEKQKRA
CCCEEEEEEEEEEEEECCCCHHHEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TLPAGSFILTLFVGGLAILFGIGTASLFHTKEVVPLENIDYQEDLAQVINQFPTVRYTFN
CCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
KTNSQLFLIGHVKNSTDKSELLYKVDALSFVKSVDDNVIDDEAVWQEMNILLSKRPEFKG
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
ISMHSPEPGKFIITGYVKTEEQAACLVDYLNIHFNYLSLLENKVVVETQMLKAIAGHLLQ
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GGFANIHVAFVNGEVILTGYVNNDDAEKFRAVVQELSGIPGVRLVKNFAVLLPAEEGIID
CCCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCCCEEE
LNLRYPNRYRVTGYSRYGEISINVVVNGRILTRGDVIDGMTVTSIQPNAIFLEKEGLKYK
EEEECCCEEEEEEECEECEEEEEEEECCEEEECCCCCCCEEEEEECCCEEEEECCCCEEE
IDYNK
EECCC
>Mature Secondary Structure 
AVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYIT
EEEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHEEECCCCCEEEE
NLDDTIPIVVNGVAIQETTQLKNEDTILLGSNQYSFLSDEFDPQDLVYDFDIPEENFSND
CCCCCCEEEEECEEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SGDLSDSNEQGKDLEPRQTSETNHSPKPKEKLTKDQGSSDPITSGDQELADAFLASAKAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
KNQPRAKVAKKGLKESSNESLNPKEQNAKDSPKGEERTNKPQNAIMEDNGASPRQDPQPK
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEECCCCCCCCCCCCCC
SAEPSLKNTARDETPLKENKPVEEKANKKATPDSPEKKDQPEEGSKKEGSKIEATPLDSQ
CCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
KESEDKEAEEAFVQEEEENLTEDNKEDSDSAADANDDTASDHTAEDNKETPKKVENEKSA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
VLSPFHVQDLFRFDQTIFPAEIDDIAKKNISVDLTQPSRFLLKVLAGANIGAEFHLDSGK
HCCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEEECCCC
TYILGTDPTTCDIVFNDLSVSHQHAKITVGNDGGILIEDLDSKNGVIVEGRKIDKTSTLS
EEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCC
SNQVVALGTTLFLLIDHHAPADTIVASLSPDDYSLFGRQQDAEALERQEAQEEEEKQKRA
CCCEEEEEEEEEEEEECCCCHHHEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TLPAGSFILTLFVGGLAILFGIGTASLFHTKEVVPLENIDYQEDLAQVINQFPTVRYTFN
CCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
KTNSQLFLIGHVKNSTDKSELLYKVDALSFVKSVDDNVIDDEAVWQEMNILLSKRPEFKG
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
ISMHSPEPGKFIITGYVKTEEQAACLVDYLNIHFNYLSLLENKVVVETQMLKAIAGHLLQ
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GGFANIHVAFVNGEVILTGYVNNDDAEKFRAVVQELSGIPGVRLVKNFAVLLPAEEGIID
CCCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCCCEEE
LNLRYPNRYRVTGYSRYGEISINVVVNGRILTRGDVIDGMTVTSIQPNAIFLEKEGLKYK
EEEECCCEEEEEEECEECEEEEEEEECCEEEECCCCCCCEEEEEECCCEEEEECCCCEEE
IDYNK
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA