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Identifier: 16752212

GI number: 16752212

Start: 1135171

End: 1136178

Strand: Direct

Name: Not Available

Synonym: CP1043

Alternate gene names: 16752212

Gene position: 1135171-1136178 (Clockwise)

Preceding gene: 16752209

Following gene: 16752213

Centisome position: 92.3

GC content: 43.06

Gene sequence:

>1008_bases
ATGGTTCGTCGATCTATTTCTTTTTGCTTGTTCTTTCTAATGACATTGCTGTGCTGTACAAGCTGTAACAGCAGGTCTCT
AATTGTGCACGGTCTTCCTGGCAGAGAAGCGAATGAGATTGTGGTGCTTTTGGTAAGCAAAGGGGTGGCTGCACAAAAAT
TGCCTCAAGCTGCAGCGGCTACAGCCGGAGCAGCTACTGAGCAAATGTGGGATATCGCGGTTCCGTCAGCACAAATCACA
GAGGCCCTTGCCATTCTAAATCAAGCGGGTCTTCCACGTATGAAAGGGACAAGCCTGTTAGATCTTTTTGCAAAACAAGG
TCTTGTTCCTTCCGAGCTTCAGGAAAAAATCCGTTATCAAGAAGGCTTATCAGAACAGATGGCCTCTACGATTAGAAAAA
TGGATGGCGTTGTCGATGCCTCAGTACAGATTTCCTTCACTACAGAAAATGAAGATAATCTTCCTTTAACAGCCTCTGTG
TATATTAAGCATCGAGGGGTTTTGGACAATCCGAACAGCATTATGGTTTCCAAAATTAAGCGCCTTATTGCAAGTGCTGT
TCCAGGACTTGTGCCAGAGAACGTCTCTGTAGTGAGCGATCGCGCAGCTTATAGTGATATTACAATTAATGGTCCTTGGG
GATTAACAGAAGAAATCGATTATGTTTCTGTTTGGGGTATTATTCTTGCGAAGTCTTCGCTCACCAAATTCCGTCTCATT
TTTTATGTCTTGATTCTCATTTTATTTGTTATTTCTTGTGGTCTCCTTTGGGTCATTTGGAAAACTCATACTCTCATTAT
GACTATGGGAGGTACAAAAGGGTTCTTCAACCCTACACCATATACAAAGAATGCCTTGGAAGCCAAGAAAGCCGAGGGAG
CAGCTGCTGACAAAGAGAAAAAAGAAGATGCAGATTCACAGGGGGAAAGCAAAAATGCGGAAACCAGTGATAAAGACTCT
AGTGATAAAGATGCTCCAGAAGGAAGCAATGAAATTGAGGGTGCTTAG

Upstream 100 bases:

>100_bases
CGTGGCTTGAAGAAAAAGAAGACAAGGATTACCATTTTATGTTCGCGATTGGCACTAATCCCCCCTTTTGTTATGGTGAA
TAAAAAGGTATGCGTGGATT

Downstream 100 bases:

>100_bases
TGACTGCCAACACTTTTGGAACTCTAGACATCTTGATGAAGCACTCCAAGGAAGATGACCTCTCCAGGTTTCTTCCTAAA
AATCTTCTTGTTGAATCTCC

Product: type III secretion protein SctJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MVRRSISFCLFFLMTLLCCTSCNSRSLIVHGLPGREANEIVVLLVSKGVAAQKLPQAAAATAGAATEQMWDIAVPSAQIT
EALAILNQAGLPRMKGTSLLDLFAKQGLVPSELQEKIRYQEGLSEQMASTIRKMDGVVDASVQISFTTENEDNLPLTASV
YIKHRGVLDNPNSIMVSKIKRLIASAVPGLVPENVSVVSDRAAYSDITINGPWGLTEEIDYVSVWGIILAKSSLTKFRLI
FYVLILILFVISCGLLWVIWKTHTLIMTMGGTKGFFNPTPYTKNALEAKKAEGAAADKEKKEDADSQGESKNAETSDKDS
SDKDAPEGSNEIEGA

Sequences:

>Translated_335_residues
MVRRSISFCLFFLMTLLCCTSCNSRSLIVHGLPGREANEIVVLLVSKGVAAQKLPQAAAATAGAATEQMWDIAVPSAQIT
EALAILNQAGLPRMKGTSLLDLFAKQGLVPSELQEKIRYQEGLSEQMASTIRKMDGVVDASVQISFTTENEDNLPLTASV
YIKHRGVLDNPNSIMVSKIKRLIASAVPGLVPENVSVVSDRAAYSDITINGPWGLTEEIDYVSVWGIILAKSSLTKFRLI
FYVLILILFVISCGLLWVIWKTHTLIMTMGGTKGFFNPTPYTKNALEAKKAEGAAADKEKKEDADSQGESKNAETSDKDS
SDKDAPEGSNEIEGA
>Mature_335_residues
MVRRSISFCLFFLMTLLCCTSCNSRSLIVHGLPGREANEIVVLLVSKGVAAQKLPQAAAATAGAATEQMWDIAVPSAQIT
EALAILNQAGLPRMKGTSLLDLFAKQGLVPSELQEKIRYQEGLSEQMASTIRKMDGVVDASVQISFTTENEDNLPLTASV
YIKHRGVLDNPNSIMVSKIKRLIASAVPGLVPENVSVVSDRAAYSDITINGPWGLTEEIDYVSVWGIILAKSSLTKFRLI
FYVLILILFVISCGLLWVIWKTHTLIMTMGGTKGFFNPTPYTKNALEAKKAEGAAADKEKKEDADSQGESKNAETSDKDS
SDKDAPEGSNEIEGA

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. Could be a part of a specific transport apparatus or a secretion apparatus that is required for pathogenicity. Hrp proteins may form a complex (tu

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 36245; Mature: 36245

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRSISFCLFFLMTLLCCTSCNSRSLIVHGLPGREANEIVVLLVSKGVAAQKLPQAAAA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHCCHHHHH
TAGAATEQMWDIAVPSAQITEALAILNQAGLPRMKGTSLLDLFAKQGLVPSELQEKIRYQ
HHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
EGLSEQMASTIRKMDGVVDASVQISFTTENEDNLPLTASVYIKHRGVLDNPNSIMVSKIK
HCHHHHHHHHHHHHCCCEECEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
RLIASAVPGLVPENVSVVSDRAAYSDITINGPWGLTEEIDYVSVWGIILAKSSLTKFRLI
HHHHHHCCCCCCCCCHHHHCCHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FYVLILILFVISCGLLWVIWKTHTLIMTMGGTKGFFNPTPYTKNALEAKKAEGAAADKEK
HHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHH
KEDADSQGESKNAETSDKDSSDKDAPEGSNEIEGA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRRSISFCLFFLMTLLCCTSCNSRSLIVHGLPGREANEIVVLLVSKGVAAQKLPQAAAA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHCCHHHHH
TAGAATEQMWDIAVPSAQITEALAILNQAGLPRMKGTSLLDLFAKQGLVPSELQEKIRYQ
HHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
EGLSEQMASTIRKMDGVVDASVQISFTTENEDNLPLTASVYIKHRGVLDNPNSIMVSKIK
HCHHHHHHHHHHHHCCCEECEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
RLIASAVPGLVPENVSVVSDRAAYSDITINGPWGLTEEIDYVSVWGIILAKSSLTKFRLI
HHHHHHCCCCCCCCCHHHHCCHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FYVLILILFVISCGLLWVIWKTHTLIMTMGGTKGFFNPTPYTKNALEAKKAEGAAADKEK
HHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHH
KEDADSQGESKNAETSDKDSSDKDAPEGSNEIEGA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]