| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752160
GI number: 16752160
Start: 1074003
End: 1074800
Strand: Direct
Name: Not Available
Synonym: CP0990
Alternate gene names: 16752160
Gene position: 1074003-1074800 (Clockwise)
Preceding gene: 16752159
Following gene: 16752161
Centisome position: 87.33
GC content: 39.47
Gene sequence:
>798_bases ATGCAAGGTTTTTTCCCTTTAGCTTCTGGATCCAAAGGGAATTCTGCTTATCTAGGCACGGATTCTTGTAAGATTCTTAT TGATTTAGGAGTGAGCAAGCAAGTCGTCACTCGGGAATTACTCTCTATGAATATCGATCCTGAAGATATTCAGGCAATTT TTGTTACGCACGAACATTCTGATCATATCTCCGGGATTAAAAGTTTTGTTAAGGCGTATAACACTCCCATTGTTTGCAAC TTGGAGACGGCTCGTGCTTTATGCCATCTACTAGATAGCCATCCAGAATTCAAAATATTTTCCACAGGGTCTTCATTTTG TTTTCAAGATCTCGAAGTACAGACGTTCAATGTACCTCATGATGCTGTAGATCCTGTGGCTTTTATTTTTCATTATCGCG AAGAGAAACTGGGTTTTTGCACAGATTTAGGTTGGGTCACCTCTTGGATCACACATGAACTCTATGATTGTGATTACTTA TTAATTGAGTCCAATCATTCCCCTGAATTGGTACGTCAATCTCAACGTCCTGATGTTTACAAAAAGCGTGTATTGAGTAA ATTAGGTCATATTTCTAACCAAGAGTGTGGTCAGCTTTTACAAAAGATTATCACTCCGAAGTTAAAGAAGTTATATCTTG CTCACCTGTCTACCGAGTGTAACACTGCGGAGCTAGCACTTTCTACAGTATCTGAATCGATAGCTTCTATCACTTCTATA GCACCAGAAATTGCATTAGCGCAGGGCATTACATCTCCAATATACTTTTCTCGTCTTGAGGTTGCATGTCCACGGTAA
Upstream 100 bases:
>100_bases GCTAGTTTAATTGATCAACTTGAAGAAGCTAGAATTATTGGGCCTTCGGAAGGAGCTAAGCCTCGTCAAATCCTGATACA GAATCCTCTGGAAGGTTAGC
Downstream 100 bases:
>100_bases CTACGGAACCTTGTTCTTCTATACACATTTCTTTGAACAATGATTGGCGAGATAGCCAGCCGTATTCTTTAGACCGAGCG AGTGAACTTCTTCATTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MQGFFPLASGSKGNSAYLGTDSCKILIDLGVSKQVVTRELLSMNIDPEDIQAIFVTHEHSDHISGIKSFVKAYNTPIVCN LETARALCHLLDSHPEFKIFSTGSSFCFQDLEVQTFNVPHDAVDPVAFIFHYREEKLGFCTDLGWVTSWITHELYDCDYL LIESNHSPELVRQSQRPDVYKKRVLSKLGHISNQECGQLLQKIITPKLKKLYLAHLSTECNTAELALSTVSESIASITSI APEIALAQGITSPIYFSRLEVACPR
Sequences:
>Translated_265_residues MQGFFPLASGSKGNSAYLGTDSCKILIDLGVSKQVVTRELLSMNIDPEDIQAIFVTHEHSDHISGIKSFVKAYNTPIVCN LETARALCHLLDSHPEFKIFSTGSSFCFQDLEVQTFNVPHDAVDPVAFIFHYREEKLGFCTDLGWVTSWITHELYDCDYL LIESNHSPELVRQSQRPDVYKKRVLSKLGHISNQECGQLLQKIITPKLKKLYLAHLSTECNTAELALSTVSESIASITSI APEIALAQGITSPIYFSRLEVACPR >Mature_265_residues MQGFFPLASGSKGNSAYLGTDSCKILIDLGVSKQVVTRELLSMNIDPEDIQAIFVTHEHSDHISGIKSFVKAYNTPIVCN LETARALCHLLDSHPEFKIFSTGSSFCFQDLEVQTFNVPHDAVDPVAFIFHYREEKLGFCTDLGWVTSWITHELYDCDYL LIESNHSPELVRQSQRPDVYKKRVLSKLGHISNQECGQLLQKIITPKLKKLYLAHLSTECNTAELALSTVSESIASITSI APEIALAQGITSPIYFSRLEVACPR
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 29566; Mature: 29566
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGFFPLASGSKGNSAYLGTDSCKILIDLGVSKQVVTRELLSMNIDPEDIQAIFVTHEHS CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHEEEEEEEECCC DHISGIKSFVKAYNTPIVCNLETARALCHLLDSHPEFKIFSTGSSFCFQDLEVQTFNVPH HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCEEEEECCCC DAVDPVAFIFHYREEKLGFCTDLGWVTSWITHELYDCDYLLIESNHSPELVRQSQRPDVY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHH KKRVLSKLGHISNQECGQLLQKIITPKLKKLYLAHLSTECNTAELALSTVSESIASITSI HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH APEIALAQGITSPIYFSRLEVACPR HHHHHHHHCCCCCHHHHHHHCCCCC >Mature Secondary Structure MQGFFPLASGSKGNSAYLGTDSCKILIDLGVSKQVVTRELLSMNIDPEDIQAIFVTHEHS CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHEEEEEEEECCC DHISGIKSFVKAYNTPIVCNLETARALCHLLDSHPEFKIFSTGSSFCFQDLEVQTFNVPH HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCEEEEECCCC DAVDPVAFIFHYREEKLGFCTDLGWVTSWITHELYDCDYLLIESNHSPELVRQSQRPDVY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHH KKRVLSKLGHISNQECGQLLQKIITPKLKKLYLAHLSTECNTAELALSTVSESIASITSI HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH APEIALAQGITSPIYFSRLEVACPR HHHHHHHHCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]