Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752068

GI number: 16752068

Start: 966657

End: 968117

Strand: Direct

Name: Not Available

Synonym: CP0896

Alternate gene names: NA

Gene position: 966657-968117 (Clockwise)

Preceding gene: 16752067

Following gene: 16752073

Centisome position: 78.6

GC content: 40.73

Gene sequence:

>1461_bases
ATGCATATGTCTAACCCCATCTCTTTGTTTTCCCCTGCAGAGTTAATAGCAAAGTACAATTTAATTCCAAAAACTTCGCC
GATTTATCCTCGGAGGACGGAACTTATTATCTTGGAAGAAAATGCGTGTCAAACACGCCTAACCAACGTGGCTCAGGTCC
TACATCCTTCTAGCCTATTCAGTATGTCAAAAAAAATACTGAATCCCTGCGGGTGCTCTGGTGGTCCCTTATGTTGGGTG
ATTCTCAACATCCTAGCATTTATTATTACTTCAGTACTGTTTATCATTCTTTTACCGGTGAATCTCATCGTAGCAGGTCT
TCGTCTCTTCATGCCTCTTCCCCCTAAAAAAATCGTAGAGGATTTAAGTGAACCTACTACTGAAGAAACGAATGAGGTCA
TTCAACCCTTCATTTTCGCTTTGCAAGCGTTGCTTTTTGAGGATAACAAACTTCGCTCTTTTAAAATTGTTGAACAAAGT
GTAGGCAAAGCACCCTTACCTAATCCCTTTTTAAATAGACTAGTAGCAATTTCGCCGCAAGAAAGCCAAGAAGCCATGCG
GAAGATTCCGGATCTATGCTCACAACTGAAAAAAGTATTAAAGTCTCTAGGCGTGCTAACTCCAGAATGGAAGCACATGC
TGAAGTACTTTGAGGGACTGAAAAACGAACATGATAGTAATCCTGATAAAAAGACGTTCCCAATATTGATCAAGCTCCTC
ATAGAAGCTCTTACTGGAAAGTCCTCTTTACCCAAAACTCCTAGTACAAAGGAAAAAATGCAAGCGGCCTTATTTATTGC
AAGTTCTTGCAAGACTTGTAAGCCGACTTGGGGAGAAGTCATAACCAGATCTCTTAACAGACTCTATAGTATAGCTAATG
AAGGAGACAATCAGCTTCTGATTTGGGTTCAAGAGTTTAAAGAACGAGAGCTGATGTCCATCCAAGATGGTGATGATGCT
GAAGAGTATCGGTTTGCGGCTCAGCAACACGGTGAGCGTTACACAGAGGCAATAGAACAAGTTCTACGAAACGAGTCAGC
AGCCAAACTACAATGGCATGTGATCAACACTATGAAATTCTTCCATGGGAAAAATCTCGGTCTAGTTACAGAACACCTAC
AAGATACTCTCGGCGCCCTAACTTTACGTCAAACTACAGTGGACACACATCAAGGCAGAGAAGACGCTGATTTGTCAGCT
GCTCTTTTCCTAAATAAGTATTTAAATTCTGGAAATCAACTTGTTAATAGCGTCTTTAAATCCATGCAAAAAGCAGATCC
AGAAACCAAAGCTTTAATCCGTGAGTTTGCTCTAGATATATTATATGCATCCTTACGGCTTCCTCAAACTTCCGCTCATA
CCGAGGTCTTTTCTACACTCTTAATGGACCCAGAGACCTATGAACCTAATAAAGCTTGTATCGCCTACTTGCTCTATGTA
TTAAAGATCATCGAACTATAA

Upstream 100 bases:

>100_bases
TGAGCTACTTTTTTATAGTATTTCTAAATAAAAATTAATTGAATAACAATCAATCTTAGAAAGTATAATAAAATATTTCT
ACTTAATCCATAACTCCAAG

Downstream 100 bases:

>100_bases
GCATTAAGAGAAATAAAAAAGGGTTACTAAAAGTAACCCTTTTTTTTGATTGAAGCCCTGTCACATCGAACTAGAAAATA
ATACGGATACCACCATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLFSMSKKILNPCGCSGGPLCWV
ILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVEDLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQS
VGKAPLPNPFLNRLVAISPQESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL
IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLLIWVQEFKERELMSIQDGDDA
EEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKFFHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSA
ALFLNKYLNSGNQLVNSVFKSMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV
LKIIEL

Sequences:

>Translated_486_residues
MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLFSMSKKILNPCGCSGGPLCWV
ILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVEDLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQS
VGKAPLPNPFLNRLVAISPQESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL
IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLLIWVQEFKERELMSIQDGDDA
EEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKFFHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSA
ALFLNKYLNSGNQLVNSVFKSMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV
LKIIEL
>Mature_486_residues
MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLFSMSKKILNPCGCSGGPLCWV
ILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVEDLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQS
VGKAPLPNPFLNRLVAISPQESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL
IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLLIWVQEFKERELMSIQDGDDA
EEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKFFHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSA
ALFLNKYLNSGNQLVNSVFKSMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV
LKIIEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54866; Mature: 54866

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLF
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCHHHHH
SMSKKILNPCGCSGGPLCWVILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQSVGKAPLPNPFLNRLVAISPQ
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHEECCCH
ESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
IWVQEFKERELMSIQDGDDAEEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKF
EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHH
FHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSAALFLNKYLNSGNQLVNSVFK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
SMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LKIIEL
HHHHCC
>Mature Secondary Structure
MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLF
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCHHHHH
SMSKKILNPCGCSGGPLCWVILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQSVGKAPLPNPFLNRLVAISPQ
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHEECCCH
ESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
IWVQEFKERELMSIQDGDDAEEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKF
EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHH
FHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSAALFLNKYLNSGNQLVNSVFK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
SMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LKIIEL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA