| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16751980
GI number: 16751980
Start: 871821
End: 872519
Strand: Direct
Name: Not Available
Synonym: CP0807
Alternate gene names: 16751980
Gene position: 871821-872519 (Clockwise)
Preceding gene: 16751979
Following gene: 16751981
Centisome position: 70.89
GC content: 38.2
Gene sequence:
>699_bases TTGCCAATGAATACATCCCACAGAAAAACATTAGTATTTTCCTACTTGTCTTCAACCTTTACTTTGCTTCTTGTTCTCTC CAATCTTGTCCTCTCTTCGAAGCTCATTCCAACGACTTTTTTTAACTTCATTATTCCTGGGGGACTCATTCTTTATCCCC TGACGTTTCTCATCTCAGACGTTGTTAACGAAATCTTTGGCCCTAAAAAAGCTCGTGTCATGATATTTTCAGCTTTTATC GCCAACCTCTTAGCTTCTTCAATTGTACAAATTTTTATGTTCTTCCCAGTAGCCTCTCCTGAGATGCAAACTGCCTGGCA CTGCTTGTTTGATTTAAGTCCTCTCCGTTTTCTAGCTTCACTACTTGCTTTCATTGTCTCTCAGCAATTAGACATCGTCC TTTACACTTTTTTTAAAAATCGAACTCCCAATTCATCTCTATGGCTACGTAGCAATGGGTCTACATGGATCTCACAAATT CCAGATACTTTCATTGTCGACACCTGTATTTTATATTTCGGCATGGGGCTTTCTTTCCCCCAAACCCTAAATATTATGTT CTACTCTTACATTTATAAAATTACTTTTTGTGTTCTCACGACACCGCTCTTTTATCTCGCTGTGAATACAATCCGCAAGT TTTTAGGGATGCCTTCTACTAAAATTGCAAATACAGTTCCTCTGATAAATCAACCTTAG
Upstream 100 bases:
>100_bases TAGAACTCACTTCAAAATTAGAATGGATGCTCGACCAAGGTCTGTTAGAATCAATTCCCCTTTACAATCAAGAGAAATAT CTTTCTGGTTTTGAGGTACT
Downstream 100 bases:
>100_bases ACAACAAGAAATAATTCATGATTATTTCTAATTTTTTAAAAATAGAGCTGCTTTATTAAAAAACGTAATTTCTCTTATTT TATTAGAATAATTCTCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MPMNTSHRKTLVFSYLSSTFTLLLVLSNLVLSSKLIPTTFFNFIIPGGLILYPLTFLISDVVNEIFGPKKARVMIFSAFI ANLLASSIVQIFMFFPVASPEMQTAWHCLFDLSPLRFLASLLAFIVSQQLDIVLYTFFKNRTPNSSLWLRSNGSTWISQI PDTFIVDTCILYFGMGLSFPQTLNIMFYSYIYKITFCVLTTPLFYLAVNTIRKFLGMPSTKIANTVPLINQP
Sequences:
>Translated_232_residues MPMNTSHRKTLVFSYLSSTFTLLLVLSNLVLSSKLIPTTFFNFIIPGGLILYPLTFLISDVVNEIFGPKKARVMIFSAFI ANLLASSIVQIFMFFPVASPEMQTAWHCLFDLSPLRFLASLLAFIVSQQLDIVLYTFFKNRTPNSSLWLRSNGSTWISQI PDTFIVDTCILYFGMGLSFPQTLNIMFYSYIYKITFCVLTTPLFYLAVNTIRKFLGMPSTKIANTVPLINQP >Mature_231_residues PMNTSHRKTLVFSYLSSTFTLLLVLSNLVLSSKLIPTTFFNFIIPGGLILYPLTFLISDVVNEIFGPKKARVMIFSAFIA NLLASSIVQIFMFFPVASPEMQTAWHCLFDLSPLRFLASLLAFIVSQQLDIVLYTFFKNRTPNSSLWLRSNGSTWISQIP DTFIVDTCILYFGMGLSFPQTLNIMFYSYIYKITFCVLTTPLFYLAVNTIRKFLGMPSTKIANTVPLINQP
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003744 [H]
Pfam domain/function: PF02592 DUF165 [H]
EC number: NA
Molecular weight: Translated: 26314; Mature: 26182
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMNTSHRKTLVFSYLSSTFTLLLVLSNLVLSSKLIPTTFFNFIIPGGLILYPLTFLISD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VVNEIFGPKKARVMIFSAFIANLLASSIVQIFMFFPVASPEMQTAWHCLFDLSPLRFLAS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH LLAFIVSQQLDIVLYTFFKNRTPNSSLWLRSNGSTWISQIPDTFIVDTCILYFGMGLSFP HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHCCCCCCC QTLNIMFYSYIYKITFCVLTTPLFYLAVNTIRKFLGMPSTKIANTVPLINQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC >Mature Secondary Structure PMNTSHRKTLVFSYLSSTFTLLLVLSNLVLSSKLIPTTFFNFIIPGGLILYPLTFLISD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VVNEIFGPKKARVMIFSAFIANLLASSIVQIFMFFPVASPEMQTAWHCLFDLSPLRFLAS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH LLAFIVSQQLDIVLYTFFKNRTPNSSLWLRSNGSTWISQIPDTFIVDTCILYFGMGLSFP HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHCCCCCCC QTLNIMFYSYIYKITFCVLTTPLFYLAVNTIRKFLGMPSTKIANTVPLINQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]