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The map label for this gene is rpmH

Identifier: 167041024

GI number: 167041024

Start: 2456810

End: 2456944

Strand: Reverse

Name: rpmH

Synonym: Teth514_2414

Alternate gene names: 167041024

Gene position: 2456944-2456810 (Counterclockwise)

Preceding gene: NA

Following gene: 167041023

Centisome position: 99.99

GC content: 36.3

Gene sequence:

>135_bases
ATGCTTCGCACTTATCAACCCAAAAAAAGACATAGAAAAAAAGTGCACGGTTTTAGAAAGAGAATGTCTACCAAAAGCGG
TCGCAATGTTTTAAAAAGAAGAAGACAAAAAGGTAGACATAGATTGACAGCGTGA

Upstream 100 bases:

>100_bases
AGTTGTTGATAATTTTCTTATTTTAAAAAGTCTTGTTGACATCCTCCTTAATTAACGTTATAATTTTTATAGCATTTTTT
AGGTTTTAGGAGGTGTGGCA

Downstream 100 bases:

>100_bases
GGCCTTTAGGGCCTTTTTTACAATCCGGAGGTATAAATGAGGAGAAAGATTGTAAAAATTAAAAAAAGTTATGAATTTAA
AAAGGTTTATTCAAATGGAA

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MLRTYQPKKRHRKKVHGFRKRMSTKSGRNVLKRRRQKGRHRLTA

Sequences:

>Translated_44_residues
MLRTYQPKKRHRKKVHGFRKRMSTKSGRNVLKRRRQKGRHRLTA
>Mature_44_residues
MLRTYQPKKRHRKKVHGFRKRMSTKSGRNVLKRRRQKGRHRLTA

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_THEP3 (B0K8I4)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001666252.1
- ProteinModelPortal:   B0K8I4
- SMR:   B0K8I4
- GeneID:   5873528
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_2295
- HOGENOM:   HBG729750
- ProtClustDB:   PRK00399
- BioCyc:   TPSE340099:TETH39_2295-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5471; Mature: 5471

Theoretical pI: Translated: 13.16; Mature: 13.16

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTYQPKKRHRKKVHGFRKRMSTKSGRNVLKRRRQKGRHRLTA
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRTYQPKKRHRKKVHGFRKRMSTKSGRNVLKRRRQKGRHRLTA
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA