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The map label for this gene is gidB [H]

Identifier: 167041017

GI number: 167041017

Start: 2450867

End: 2451589

Strand: Reverse

Name: gidB [H]

Synonym: Teth514_2407

Alternate gene names: 167041017

Gene position: 2451589-2450867 (Counterclockwise)

Preceding gene: 167041018

Following gene: 167041016

Centisome position: 99.77

GC content: 30.98

Gene sequence:

>723_bases
ATGAAGAACAAATCGGTTGAAATGCTAATTGAGGGCGCTAAAGAGTGGGGTATATTTTTGGAAATGTTCCATGTGGAACA
TTTCCAAAAATATTATGCTCTTTTATTGGAATGGAATCAGAAGATGAATTTAACGGCAATTACAGAAGAAAGTGAAGTTG
TGATTAAGCATTTCTTAGATAGCTTATCTGTGGTTAAGAGTGGAAAAATAAAAGAGGAAGAAAAAATTATAGATGTTGGT
ACAGGTGCTGGTTTTCCTTGTATTCCTTTAAAAATTGTGTTCCCTAAATTAAAAGCTACTCTTTTAGACTCTTCTAAAAA
AAGAATTACTTTTTTAGAAGAGGTTATAAATAAATTGGGTATAAATGAAATAGAATTAATTCACGGAAGAGCAGAAGATA
TAGGAAAAGACATAAAATATAGAGAACAATTTGATTTATCCGTGGCAAGAGCTGTTGCACCTTTAAATATTTTGTTGGAG
TACACTCTTCCTTTTGTAAAAGTAGATGGTTATTTTATTGCTTTAAAAGGAAGAGAGATTGAAGAGGAAATAGAAAATAG
TCAAAGAGCTTTGAAGGAATTAAAGGGGGAAATCGAGGAAGTAAAGGAAATTAAACTTCCTTATAGTGATATAGTTCATC
ATTTGGTGATTATTAAAAAAATAGACAATTGCCCTACAAAGTATCCTAGAAGGGCAAATGCTATACAAAGATCTCCTTTA
TAA

Upstream 100 bases:

>100_bases
CCTACTTCAATTGGACAGGCTTCTCGTATTTCAGGAGTTTCGCCTGCTGATATTTCTGTGCTTTTAATTTACATGCAGCA
GTTAAGGAGAAATAAAGAAG

Downstream 100 bases:

>100_bases
ACTTAAAGGAGAAAATTTCGGCGACTAAACATAAGCTTCCCCTCGGACTCCGGCAGGGTTCCGGGCACATTCGGCGTCCT
TGCCTTAGTGCCCGCCTTCG

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKNKSVEMLIEGAKEWGIFLEMFHVEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIKEEEKIIDVG
TGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLE
YTLPFVKVDGYFIALKGREIEEEIENSQRALKELKGEIEEVKEIKLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSPL

Sequences:

>Translated_240_residues
MKNKSVEMLIEGAKEWGIFLEMFHVEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIKEEEKIIDVG
TGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLE
YTLPFVKVDGYFIALKGREIEEEIENSQRALKELKGEIEEVKEIKLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSPL
>Mature_240_residues
MKNKSVEMLIEGAKEWGIFLEMFHVEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIKEEEKIIDVG
TGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLE
YTLPFVKVDGYFIALKGREIEEEIENSQRALKELKGEIEEVKEIKLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSPL

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=206, Percent_Identity=35.9223300970874, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: 2.1.-.-

Molecular weight: Translated: 27605; Mature: 27605

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKSVEMLIEGAKEWGIFLEMFHVEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH
SLSVVKSGKIKEEEKIIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLG
HHHHHHCCCCCCCHHEEEECCCCCCCCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHCC
INEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVKVDGYFIALKGREI
CCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCH
EEEIENSQRALKELKGEIEEVKEIKLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MKNKSVEMLIEGAKEWGIFLEMFHVEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH
SLSVVKSGKIKEEEKIIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLG
HHHHHHCCCCCCCHHEEEECCCCCCCCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHCC
INEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVKVDGYFIALKGREI
CCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCH
EEEIENSQRALKELKGEIEEVKEIKLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA