Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 167041014

GI number: 167041014

Start: 2448285

End: 2449052

Strand: Reverse

Name: soj [H]

Synonym: Teth514_2404

Alternate gene names: 167041014

Gene position: 2449052-2448285 (Counterclockwise)

Preceding gene: 167041015

Following gene: 167041013

Centisome position: 99.67

GC content: 34.11

Gene sequence:

>768_bases
ATGGGCAAAGTTATTGCCATCGCAAATCAAAAAGGTGGAGTTGGTAAAACCACCACAACTATAAACTTAGGATATTCTTT
AGCAACACAAGGGAAAAAAGTTTTATGTATAGATATAGATCCTCAAAGTAATATGACGAGTGGCTTTGGGATAAACCCGG
CTTCTTTAAAGCACACTACATATACGGTACTGATTGAAGATGAAGACATAAGAAATGCAATAATACCTTTAAAGGATTTA
AAAGTTTCAATTGTTCCATCTAGTATTCAATTGGCAGGGGCAGAGATTGAATTGGTCCCTATGCTTTCACGAGAATATAA
ATTAAAAAATGCTGTAAATCAAATTAAAGATGAATTTGATTATATATTAATAGATTGTCCTCCATCACTTGGACTTTTGA
CTATAAATGCTCTTACTGCTGCTGATTCAGTAATTGTTCCAATTCAGTGTGAATATTATGCTTTAGAAGGACTTACCCAG
CTTATGAATACAATCAATCTTGTAAAAAAGAGTCTGAACCCTGAATTGGAAATAGAGGGTGTAGTTCTTACTATGTTTAA
CGCTCGGACAAACTTATCTATACAAGTGGTAGATGAGGTGAAAAAATTTTTTAAAGACAAAGTTTATGGAACAATTATTC
CACGAAATATTCGCTTGGGGGAAGCACCAAGTTTTGGAAAACCAATTTCTATATATGACCCTAATTCTAAAGGAGCAGAG
GCTTATGATGAATTGGCATTAGAAGTGATAGAAAGGGCAGGGATATGA

Upstream 100 bases:

>100_bases
GATAATGTTCCATGTGGAACATTGATATAAACAATGATATAATAAACATATAAATTGATAACTCTTAAACCGGTATTTGC
ATGCAAAAGGGGGTGAAAAA

Downstream 100 bases:

>100_bases
AAAATTTACAAAGGTGGTGATGAAATGGCTGGTAAAAAGGGGTTAGGTAGAGGATTGCAGGCTCTTATACCGGAATATCG
AACAGAGGAACCCCAAGGGG

Product: cobyrinic acid a,c-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MGKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTTYTVLIEDEDIRNAIIPLKDL
KVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFDYILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQ
LMNTINLVKKSLNPELEIEGVVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE
AYDELALEVIERAGI

Sequences:

>Translated_255_residues
MGKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTTYTVLIEDEDIRNAIIPLKDL
KVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFDYILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQ
LMNTINLVKKSLNPELEIEGVVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE
AYDELALEVIERAGI
>Mature_254_residues
GKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTTYTVLIEDEDIRNAIIPLKDLK
VSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFDYILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQL
MNTINLVKKSLNPELEIEGVVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAEA
YDELALEVIERAGI

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27830; Mature: 27698

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTT
CCCEEEEECCCCCCCCEEEEEEECEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
YTVLIEDEDIRNAIIPLKDLKVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFD
EEEEEECCCCCHHCCCHHHCEEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHCCC
YILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQLMNTINLVKKSLNPELEIEG
EEEEECCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
VVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE
EEEEEEECCCCCEEEEHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCEEEECCCCCCHH
AYDELALEVIERAGI
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTT
CCEEEEECCCCCCCCEEEEEEECEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
YTVLIEDEDIRNAIIPLKDLKVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFD
EEEEEECCCCCHHCCCHHHCEEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHCCC
YILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQLMNTINLVKKSLNPELEIEG
EEEEECCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
VVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE
EEEEEEECCCCCEEEEHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCEEEECCCCCCHH
AYDELALEVIERAGI
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]