| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is soj [H]
Identifier: 167041014
GI number: 167041014
Start: 2448285
End: 2449052
Strand: Reverse
Name: soj [H]
Synonym: Teth514_2404
Alternate gene names: 167041014
Gene position: 2449052-2448285 (Counterclockwise)
Preceding gene: 167041015
Following gene: 167041013
Centisome position: 99.67
GC content: 34.11
Gene sequence:
>768_bases ATGGGCAAAGTTATTGCCATCGCAAATCAAAAAGGTGGAGTTGGTAAAACCACCACAACTATAAACTTAGGATATTCTTT AGCAACACAAGGGAAAAAAGTTTTATGTATAGATATAGATCCTCAAAGTAATATGACGAGTGGCTTTGGGATAAACCCGG CTTCTTTAAAGCACACTACATATACGGTACTGATTGAAGATGAAGACATAAGAAATGCAATAATACCTTTAAAGGATTTA AAAGTTTCAATTGTTCCATCTAGTATTCAATTGGCAGGGGCAGAGATTGAATTGGTCCCTATGCTTTCACGAGAATATAA ATTAAAAAATGCTGTAAATCAAATTAAAGATGAATTTGATTATATATTAATAGATTGTCCTCCATCACTTGGACTTTTGA CTATAAATGCTCTTACTGCTGCTGATTCAGTAATTGTTCCAATTCAGTGTGAATATTATGCTTTAGAAGGACTTACCCAG CTTATGAATACAATCAATCTTGTAAAAAAGAGTCTGAACCCTGAATTGGAAATAGAGGGTGTAGTTCTTACTATGTTTAA CGCTCGGACAAACTTATCTATACAAGTGGTAGATGAGGTGAAAAAATTTTTTAAAGACAAAGTTTATGGAACAATTATTC CACGAAATATTCGCTTGGGGGAAGCACCAAGTTTTGGAAAACCAATTTCTATATATGACCCTAATTCTAAAGGAGCAGAG GCTTATGATGAATTGGCATTAGAAGTGATAGAAAGGGCAGGGATATGA
Upstream 100 bases:
>100_bases GATAATGTTCCATGTGGAACATTGATATAAACAATGATATAATAAACATATAAATTGATAACTCTTAAACCGGTATTTGC ATGCAAAAGGGGGTGAAAAA
Downstream 100 bases:
>100_bases AAAATTTACAAAGGTGGTGATGAAATGGCTGGTAAAAAGGGGTTAGGTAGAGGATTGCAGGCTCTTATACCGGAATATCG AACAGAGGAACCCCAAGGGG
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MGKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTTYTVLIEDEDIRNAIIPLKDL KVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFDYILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQ LMNTINLVKKSLNPELEIEGVVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE AYDELALEVIERAGI
Sequences:
>Translated_255_residues MGKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTTYTVLIEDEDIRNAIIPLKDL KVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFDYILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQ LMNTINLVKKSLNPELEIEGVVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE AYDELALEVIERAGI >Mature_254_residues GKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTTYTVLIEDEDIRNAIIPLKDLK VSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFDYILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQL MNTINLVKKSLNPELEIEGVVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAEA YDELALEVIERAGI
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27830; Mature: 27698
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTT CCCEEEEECCCCCCCCEEEEEEECEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE YTVLIEDEDIRNAIIPLKDLKVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFD EEEEEECCCCCHHCCCHHHCEEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHCCC YILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQLMNTINLVKKSLNPELEIEG EEEEECCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE EEEEEEECCCCCEEEEHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCEEEECCCCCCHH AYDELALEVIERAGI HHHHHHHHHHHHHCC >Mature Secondary Structure GKVIAIANQKGGVGKTTTTINLGYSLATQGKKVLCIDIDPQSNMTSGFGINPASLKHTT CCEEEEECCCCCCCCEEEEEEECEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE YTVLIEDEDIRNAIIPLKDLKVSIVPSSIQLAGAEIELVPMLSREYKLKNAVNQIKDEFD EEEEEECCCCCHHCCCHHHCEEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHCCC YILIDCPPSLGLLTINALTAADSVIVPIQCEYYALEGLTQLMNTINLVKKSLNPELEIEG EEEEECCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VVLTMFNARTNLSIQVVDEVKKFFKDKVYGTIIPRNIRLGEAPSFGKPISIYDPNSKGAE EEEEEEECCCCCEEEEHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCEEEECCCCCCHH AYDELALEVIERAGI HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]