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The map label for this gene is splB [H]

Identifier: 167040947

GI number: 167040947

Start: 2376788

End: 2377786

Strand: Reverse

Name: splB [H]

Synonym: Teth514_2336

Alternate gene names: 167040947

Gene position: 2377786-2376788 (Counterclockwise)

Preceding gene: 167040948

Following gene: 167040946

Centisome position: 96.77

GC content: 29.53

Gene sequence:

>999_bases
TTGAAAAAATTCTCTCACATTTACATTGAGAAGGAGGTATTGGACAATCTTACAACGCAAAATATTTTAAAGAAATTTCC
TAAAAGTAAAGTAATCCTTATTGACAGGTATAGTGAGGTTTTCAATAGACCTAATCAAAACTACCTTATCCAAAAAGAGA
GGCAAAATCTGATATTGGCCAAAAAAAGATATGATTTTATATATAAAGGTTCTAAGCTTTGTGAAGACTTTGGAAATATC
AATTTTTACCATACATCAATTATATTCAATTGTGTGTATGATTGTGATTATTGCTATTTACAGGGTATGTACCCTTCAGG
ACATCTTGTTATTTTTGTGAATATTGAGGACTATTTTAAAGAAGTAGACAAACTGACACAGGATCATAAAGTTTATCTAA
GCATATCTTATGAGACAGATTTACTTACTCTAGAATATCTTACAGGTTTTACTAAACAGTGGATCGAATATGCCAAAGGA
AATAAAAACCTTGTAATAGAAATACGAACAAAAAGTGCTAATTTTTATTCTGTAGAATTTATCGACATACCCTCTAATGT
AATTTTCGCATGGACATTGTTGCCCCAACCGGTCATTGATAAATATGAAAAACTAACACCTTCTCTCAGTAAAAGGATAG
AAAGCATAAAAAGAGCGATATCAAAGGGTTTAAAAGTCAGAATTTCTATTGAGCCTGTGATGTATATAGAAGGATTTGAA
AAGATATATAAAGGTTTTGTGGAATATGTTTTTTCCAAAATACCTAAAGAAGGCATACAAGATGTCAATATTGGAGCTTT
TAGAATGGTAAAGGAGCAAGCTAAAAAAATAGAAAAATTAAAAGAATATTCTCCAATATTTTGCTATGATACGGTTTTGA
GAGATGGAATATTTACCTATAAAGAGGCAGAATATTTTGAGGAATTTGTTTATAGAGAAGTAATAAAATATATTGAAAAG
GAAAAAGTGTATGTATTAAACAAACTCCCCTCTAACTAA

Upstream 100 bases:

>100_bases
GCTTGCCTACATTATAAGATTAGAAAAAATGAAGGTATAGATTTTTTAAAAAACTTTTATGATTTACAGGTAAATAATAA
AGAAGAAAGGAAGAAGGCCT

Downstream 100 bases:

>100_bases
GGGGGGTCAGACTGTAGACAAACTTTCGTAAAGGAGATATTTTGCATAAGGAGCGACTTGTTACAAAGCGGCCCGGCACT
CAAGTAAGTATGCTTGTTTT

Product: DNA repair photolyase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKKFSHIYIEKEVLDNLTTQNILKKFPKSKVILIDRYSEVFNRPNQNYLIQKERQNLILAKKRYDFIYKGSKLCEDFGNI
NFYHTSIIFNCVYDCDYCYLQGMYPSGHLVIFVNIEDYFKEVDKLTQDHKVYLSISYETDLLTLEYLTGFTKQWIEYAKG
NKNLVIEIRTKSANFYSVEFIDIPSNVIFAWTLLPQPVIDKYEKLTPSLSKRIESIKRAISKGLKVRISIEPVMYIEGFE
KIYKGFVEYVFSKIPKEGIQDVNIGAFRMVKEQAKKIEKLKEYSPIFCYDTVLRDGIFTYKEAEYFEEFVYREVIKYIEK
EKVYVLNKLPSN

Sequences:

>Translated_332_residues
MKKFSHIYIEKEVLDNLTTQNILKKFPKSKVILIDRYSEVFNRPNQNYLIQKERQNLILAKKRYDFIYKGSKLCEDFGNI
NFYHTSIIFNCVYDCDYCYLQGMYPSGHLVIFVNIEDYFKEVDKLTQDHKVYLSISYETDLLTLEYLTGFTKQWIEYAKG
NKNLVIEIRTKSANFYSVEFIDIPSNVIFAWTLLPQPVIDKYEKLTPSLSKRIESIKRAISKGLKVRISIEPVMYIEGFE
KIYKGFVEYVFSKIPKEGIQDVNIGAFRMVKEQAKKIEKLKEYSPIFCYDTVLRDGIFTYKEAEYFEEFVYREVIKYIEK
EKVYVLNKLPSN
>Mature_332_residues
MKKFSHIYIEKEVLDNLTTQNILKKFPKSKVILIDRYSEVFNRPNQNYLIQKERQNLILAKKRYDFIYKGSKLCEDFGNI
NFYHTSIIFNCVYDCDYCYLQGMYPSGHLVIFVNIEDYFKEVDKLTQDHKVYLSISYETDLLTLEYLTGFTKQWIEYAKG
NKNLVIEIRTKSANFYSVEFIDIPSNVIFAWTLLPQPVIDKYEKLTPSLSKRIESIKRAISKGLKVRISIEPVMYIEGFE
KIYKGFVEYVFSKIPKEGIQDVNIGAFRMVKEQAKKIEKLKEYSPIFCYDTVLRDGIFTYKEAEYFEEFVYREVIKYIEK
EKVYVLNKLPSN

Specific function: Involved in repair of UV radiation-induced DNA damage during spore germination. Can repair thymine dimer 5-thyminyl-5,6- dihydrothymine (known as spore photoproduct (SP)) by in situ monomerization of SP to two thymines [H]

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. SPL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR004594 [H]

Pfam domain/function: NA

EC number: =4.1.99.14 [H]

Molecular weight: Translated: 39471; Mature: 39471

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFSHIYIEKEVLDNLTTQNILKKFPKSKVILIDRYSEVFNRPNQNYLIQKERQNLILA
CCCCHHHEEEHHHHHCHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCEEEECCCCEEEE
KKRYDFIYKGSKLCEDFGNINFYHTSIIFNCVYDCDYCYLQGMYPSGHLVIFVNIEDYFK
EHHHHHHCCCHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHH
EVDKLTQDHKVYLSISYETDLLTLEYLTGFTKQWIEYAKGNKNLVIEIRTKSANFYSVEF
HHHHHCCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEE
IDIPSNVIFAWTLLPQPVIDKYEKLTPSLSKRIESIKRAISKGLKVRISIEPVMYIEGFE
EECCCCEEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHH
KIYKGFVEYVFSKIPKEGIQDVNIGAFRMVKEQAKKIEKLKEYSPIFCYDTVLRDGIFTY
HHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCHHH
KEAEYFEEFVYREVIKYIEKEKVYVLNKLPSN
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
>Mature Secondary Structure
MKKFSHIYIEKEVLDNLTTQNILKKFPKSKVILIDRYSEVFNRPNQNYLIQKERQNLILA
CCCCHHHEEEHHHHHCHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCEEEECCCCEEEE
KKRYDFIYKGSKLCEDFGNINFYHTSIIFNCVYDCDYCYLQGMYPSGHLVIFVNIEDYFK
EHHHHHHCCCHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHH
EVDKLTQDHKVYLSISYETDLLTLEYLTGFTKQWIEYAKGNKNLVIEIRTKSANFYSVEF
HHHHHCCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEE
IDIPSNVIFAWTLLPQPVIDKYEKLTPSLSKRIESIKRAISKGLKVRISIEPVMYIEGFE
EECCCCEEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHH
KIYKGFVEYVFSKIPKEGIQDVNIGAFRMVKEQAKKIEKLKEYSPIFCYDTVLRDGIFTY
HHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCHHH
KEAEYFEEFVYREVIKYIEKEKVYVLNKLPSN
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8449881; 9384377; 9353924 [H]