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The map label for this gene is 167040935

Identifier: 167040935

GI number: 167040935

Start: 2365614

End: 2366324

Strand: Reverse

Name: 167040935

Synonym: Teth514_2324

Alternate gene names: NA

Gene position: 2366324-2365614 (Counterclockwise)

Preceding gene: 167040936

Following gene: 167040934

Centisome position: 96.3

GC content: 30.8

Gene sequence:

>711_bases
ATGGTCATATTCGATTTATGGGGTAAATTTGCTCATTTCAGGAAATTTTATACAAATTCATCTTCTTTAACTTATTCTGT
TCCACCCAGGACTACAGTAGAAGGAATGATAGCTGCTTTGTTAGGTTATGAAAGAGATACTTATTATGAAAAATTAAATG
CAGAAAATTTGTATGTAGCTGTTAGAAAGATGAGCAAAACAAAGAAAATAATGCAATCTGTTAATTATATCAAAGCAACT
ACTCTTGGAGAACTACATTTTCCTAAACAGCATACGCAAATACCTTTTGAATTATTGATTAGTGATAGTAAAATACGTTA
CAGATTCTATATTATACATAAAGATGAAAATATTTTTAGAGAAATAAAAGAGCGACTCTTCAAAAAGGCTCCTGTTTTTC
CGCTCTACTTTGGAAGTGCGCCTTTTAGTTGCTATATAGATTATGTTGAGGAAGTAACTTGGGATTGGGCAACAAGTGAA
GATTTTCAAGATATTTATAGTGTTATGCCAAGTGACAAAATTAAAGAAATAGATATCAAAAATATGAAAGGATATTTACT
TAAAGAGAGAATGCCGAGGGATTTTGGGATAGATAGAACAATAAAAGAAGTAACTACATATGTGTATGAGGATGTAGGAC
ATCCAATTCGAGTGAAAGTTAATGGGGAATTTATCAAACTTTCAAACGGTGAGAATATAGTGTTTATGTAA

Upstream 100 bases:

>100_bases
ATGAAAGGTTAGAATTAAACATTAATGGCGAGAAAGTTACTTTTGAGGAGGCATTTAAAGAGTTACCACTAAAAAAGGTA
GATTAGGATGGTGACTTCCA

Downstream 100 bases:

>100_bases
GAAGGTGGTGTATTATGAAATACTATTCTCACTATGATGAAGAGATGAAATATGAGAAACTGTTATATGAGCACTTGATA
GAAGTAAAAAATCTATCAAT

Product: CRISPR-associated Cas5 family Hmari subtype protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Hmari Subtype Protein; CRISPR-Associated Cas5 Family Protein; Crispr-Associated Hmari Subtype; Cas5h Crispr-Associated Hmari Subtype; CRISPR-Associated Cas5h Family Protein; CRISPR-Associated Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVAVRKMSKTKKIMQSVNYIKAT
TLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFREIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSE
DFQDIYSVMPSDKIKEIDIKNMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM

Sequences:

>Translated_236_residues
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVAVRKMSKTKKIMQSVNYIKAT
TLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFREIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSE
DFQDIYSVMPSDKIKEIDIKNMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM
>Mature_236_residues
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVAVRKMSKTKKIMQSVNYIKAT
TLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFREIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSE
DFQDIYSVMPSDKIKEIDIKNMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27911; Mature: 27911

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVA
CEEEHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH
VRKMSKTKKIMQSVNYIKATTLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFR
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCHHHH
EIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSEDFQDIYSVMPSDKIKEIDIK
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEECCCC
NMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEC
>Mature Secondary Structure
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVA
CEEEHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH
VRKMSKTKKIMQSVNYIKATTLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFR
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCHHHH
EIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSEDFQDIYSVMPSDKIKEIDIK
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEECCCC
NMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA