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The map label for this gene is 167040928

Identifier: 167040928

GI number: 167040928

Start: 2336260

End: 2336523

Strand: Reverse

Name: 167040928

Synonym: Teth514_2316

Alternate gene names: NA

Gene position: 2336523-2336260 (Counterclockwise)

Preceding gene: 167040929

Following gene: 167040927

Centisome position: 95.09

GC content: 28.79

Gene sequence:

>264_bases
ATGTTTTTAATTTTAGTATACGATGTGAATGAAAAAAGGGTCAATAAAGTCTTAAAAACTTGCAGAAAATACCTTCACTG
GGTTCAAAATTCTGTTTTAGAAGGCGAAATATCAGAAGCCAATCTTAAAAAACTAAAAATAGAGCTTTCAAGAATAATAG
ACAAAGATGAGGATTCAGTTATTTTTTATATTTTACGGACTACCAAATATTCTGAAAGAGAAATCCTTGGGCTTAGAAAA
GGTGGAGAAGACATAATTATATAA

Upstream 100 bases:

>100_bases
AGACTTATAAGATTAGAGTTGTATAAATTGGAAAAACACTTGATTGAAGAAGAACAGTACAAGCCTTTTATTGCACAATG
GTAAATTTAGGTGATAAGAT

Downstream 100 bases:

>100_bases
AATTTACATTTCAAAGCAAATAAAGACAAAAATTTAACAAAGCAGGAATTGACTATTTTATGTCGAATTTAATAATTATG
AACATTATTTTAAAATACAC

Product: CRISPR-associated Cas2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSVIFYILRTTKYSEREILGLRK
GGEDIII

Sequences:

>Translated_87_residues
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSVIFYILRTTKYSEREILGLRK
GGEDIII
>Mature_87_residues
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSVIFYILRTTKYSEREILGLRK
GGEDIII

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021127
- InterPro:   IPR000640
- InterPro:   IPR019199 [H]

Pfam domain/function: PF09827 CRISPR_Cas2 [H]

EC number: NA

Molecular weight: Translated: 10285; Mature: 10285

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSV
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCE
IFYILRTTKYSEREILGLRKGGEDIII
EEEEEECCCCCCHHHEEECCCCCCCCC
>Mature Secondary Structure
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSV
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCE
IFYILRTTKYSEREILGLRKGGEDIII
EEEEEECCCCCCHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]