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The map label for this gene is lytR [H]

Identifier: 167040853

GI number: 167040853

Start: 2236040

End: 2236951

Strand: Direct

Name: lytR [H]

Synonym: Teth514_2233

Alternate gene names: 167040853

Gene position: 2236040-2236951 (Clockwise)

Preceding gene: 167040849

Following gene: 167040876

Centisome position: 91.0

GC content: 31.36

Gene sequence:

>912_bases
ATGAAAAGAAAGAAATGGTTTATTTTCTTTTTAATATTATCTATTGTAGCTTCAGGAGCCTTTTTTGTATATTATAAATA
CATACGTATAACAAAACATCCAGAGAGTGTATTTAACAATGATAATAAAAATAATATTTCCAATTCTGAACAAGCATTAC
CTAAAGACAAAGTATATATTGCCTTTTTAGGCTTAGATAAAAATGATGAAAGAGTACACACTCTAGGAAGTTTTAGGACT
GACACTATAATGATATTTTCAATTGATTTAAATGATAAAGTCGTAAAAGTTCTTTCCATTCCGCGAGATACATACGTAGA
TATTCCCGGATTTCATAAAGACAAAATAAATGCTGCATATGTATATGGCGGTATGGGAGAAAAAGGTTATGCTCTTAGCT
TAAAAACCATAAGTGATTTTTTAGGTATCGATGTGCCTTATTACATTTCAATAGACATGCAGACAATACCAGATATTGTA
GACGCAATCGGTGGAGTACCCCTCGATGTAGAAGTAAATATGCATAGCCATGGAGCCAACTTAGATAAAGGATACCAAAT
TTTAGATGGGCAAAAGGCTTATCAGTATCTAAGATGGAGATATGACCCCATGGGAGATATAAACAGAATTAAAAGGCAAC
AAAAGTTTATAATTGCCTTTGCCAACCAGCTTAAAAGTAAAGCAAAAGATGTTTCTACTTATATAAATTTATACAATACT
TTTAAAGGAAAGTTGTACACTAATCTCAATTATGAGCAAATACTTGCCTTAATATACGCTGTTAAAGACATATCACCAGA
TTCGATAGAAAAATTCACAGTGCCAGGAGACTTTTATGATTTAAATGGAATAAGTTACTGGAAGCCAGATATGGAAAAAT
TAAACGAGGTGCTTCAAGAATTCACAAAATAA

Upstream 100 bases:

>100_bases
TATTCTTTTTAAAAAACTATTTACTTTTTATTAGAAAATGAGTTAAAATAATAGTTGTGCCATAACAAAATATTCTAGTA
CGTTTTATGAGGTGAAACAA

Downstream 100 bases:

>100_bases
AGAGACGCAGCTAGAAGCGTCTCTTTATTTTGTGAAACCAACTTAGTTTCTTTTTTATTGGTTCTATCACTTCAATATCT
TCACCATTAATCACTTTTTG

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKRKKWFIFFLILSIVASGAFFVYYKYIRITKHPESVFNNDNKNNISNSEQALPKDKVYIAFLGLDKNDERVHTLGSFRT
DTIMIFSIDLNDKVVKVLSIPRDTYVDIPGFHKDKINAAYVYGGMGEKGYALSLKTISDFLGIDVPYYISIDMQTIPDIV
DAIGGVPLDVEVNMHSHGANLDKGYQILDGQKAYQYLRWRYDPMGDINRIKRQQKFIIAFANQLKSKAKDVSTYINLYNT
FKGKLYTNLNYEQILALIYAVKDISPDSIEKFTVPGDFYDLNGISYWKPDMEKLNEVLQEFTK

Sequences:

>Translated_303_residues
MKRKKWFIFFLILSIVASGAFFVYYKYIRITKHPESVFNNDNKNNISNSEQALPKDKVYIAFLGLDKNDERVHTLGSFRT
DTIMIFSIDLNDKVVKVLSIPRDTYVDIPGFHKDKINAAYVYGGMGEKGYALSLKTISDFLGIDVPYYISIDMQTIPDIV
DAIGGVPLDVEVNMHSHGANLDKGYQILDGQKAYQYLRWRYDPMGDINRIKRQQKFIIAFANQLKSKAKDVSTYINLYNT
FKGKLYTNLNYEQILALIYAVKDISPDSIEKFTVPGDFYDLNGISYWKPDMEKLNEVLQEFTK
>Mature_303_residues
MKRKKWFIFFLILSIVASGAFFVYYKYIRITKHPESVFNNDNKNNISNSEQALPKDKVYIAFLGLDKNDERVHTLGSFRT
DTIMIFSIDLNDKVVKVLSIPRDTYVDIPGFHKDKINAAYVYGGMGEKGYALSLKTISDFLGIDVPYYISIDMQTIPDIV
DAIGGVPLDVEVNMHSHGANLDKGYQILDGQKAYQYLRWRYDPMGDINRIKRQQKFIIAFANQLKSKAKDVSTYINLYNT
FKGKLYTNLNYEQILALIYAVKDISPDSIEKFTVPGDFYDLNGISYWKPDMEKLNEVLQEFTK

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 34928; Mature: 34928

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKKWFIFFLILSIVASGAFFVYYKYIRITKHPESVFNNDNKNNISNSEQALPKDKVYI
CCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHCCCCCCCCCCHHHCCCCCCEEE
AFLGLDKNDERVHTLGSFRTDTIMIFSIDLNDKVVKVLSIPRDTYVDIPGFHKDKINAAY
EEEECCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCCCCCCCEEE
VYGGMGEKGYALSLKTISDFLGIDVPYYISIDMQTIPDIVDAIGGVPLDVEVNMHSHGAN
EECCCCCCCEEEEHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCC
LDKGYQILDGQKAYQYLRWRYDPMGDINRIKRQQKFIIAFANQLKSKAKDVSTYINLYNT
CCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FKGKLYTNLNYEQILALIYAVKDISPDSIEKFTVPGDFYDLNGISYWKPDMEKLNEVLQE
CCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHH
FTK
HCC
>Mature Secondary Structure
MKRKKWFIFFLILSIVASGAFFVYYKYIRITKHPESVFNNDNKNNISNSEQALPKDKVYI
CCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHCCCCCCCCCCHHHCCCCCCEEE
AFLGLDKNDERVHTLGSFRTDTIMIFSIDLNDKVVKVLSIPRDTYVDIPGFHKDKINAAY
EEEECCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCCCCCCCEEE
VYGGMGEKGYALSLKTISDFLGIDVPYYISIDMQTIPDIVDAIGGVPLDVEVNMHSHGAN
EECCCCCCCEEEEHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCC
LDKGYQILDGQKAYQYLRWRYDPMGDINRIKRQQKFIIAFANQLKSKAKDVSTYINLYNT
CCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FKGKLYTNLNYEQILALIYAVKDISPDSIEKFTVPGDFYDLNGISYWKPDMEKLNEVLQE
CCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHH
FTK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663927 [H]