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The map label for this gene is ugpB [C]

Identifier: 167040824

GI number: 167040824

Start: 2201890

End: 2203152

Strand: Reverse

Name: ugpB [C]

Synonym: Teth514_2201

Alternate gene names: 167040824

Gene position: 2203152-2201890 (Counterclockwise)

Preceding gene: 167040825

Following gene: 167040823

Centisome position: 89.66

GC content: 37.13

Gene sequence:

>1263_bases
ATGAGTAAAAAACTTATAAGCATCTTTGTATTGACGATCTTTGTATTAGCTACTGTTTTAGCTGGTTGTTCATCCAGTAA
AAATAATACTTCCAGTGCCAATGAGACAAATACACAAAAACAAGAGACAGCAAAACCAGTTACTATAAAATTAGGCATGT
GGTCTTCATCTCCAGCAGAAAAGAAGATAGTGGATGACCAAATAGCTAAGTTTAAAGAAAAATATCCAAATATAGATGTG
CAAATTGAGACAATTGTGGGAGATTACATGCAAAAATTACAAACAGAACTGGCGTCAAATACAGCACCAGACATATTCTA
TCTTGACAGCATGCCGGCACCACAGCTTATGTCTTCAGGAGTTTTAGAGCCATTAGATGATTATATTAAGAAATACAATG
TGGATGTAAATGATTTCGAGCCAGCATTGCTTTCCGCTTTTCAGTGGGATGGAAAAACTTATGGTTTACCAAAGGATTTC
AATACTCTAGCTTTGTTTTACAACAAAGACATGTTTAAAGCGGCTGGAATAAATGAGCCTCCAAAAACATGGGAGGAATT
AAGAGATGTAGCTAAAAAATTGACAAAAGACGGTGTCAAAGGTTTGGTTTTATCAGCAGACCTTGCAAGATTTGATGCTT
TTATAAATCAAAATGGTGGTTCAGTATATCAAGATGGAAAAGTTACTTTAAATCTGCCAGAGAATGCACAAGCTCTTGAT
TTTTATGTGAGCCTCATCACAAAAGACAAAGTTGCTGACACACCACAAAACATGGGAGAAGGCTGGAATGGAGATGCTTT
TGCTGCTAAAAAAGCTGCAATGGCAATAGAAGGTGGCTGGATGATACCATTCCTCAAAGAAAAAGCTCCTGATTTAAACT
ATGGTATAGCAGAGCTTCCAGCAGGAAAGCAAAAATCTACAATGGCTTTCACTGTTGCATATGTGATGAATAAAAACAGC
AAACATAAAGATGAAGCCTTTAAACTTATTGAATTTTTAACCGGTAAAGAAGGACAGCAATTTGTAGTAGATTCAGGCCT
TGCACTTCCATCGAGAAAGTCTATGCAAGAAGGATTTAAGGAGAAATATCCTGAAAGAGCTGCCTTTGTAGATGGTGCTT
CTTATGCGGTACCATGGCAATTCGGTTTGTATGGCACAAAGGTAGTAGATGCGGCTAATAAAGCCTGTGAAGCATTAATA
ATGAAGCAAATAAGTAGTGCTCAGCAAGCTCTTGACAACGCACAAAAGGAAGTTGGACAATAA

Upstream 100 bases:

>100_bases
AAATTGATTAAGTTTTAAGGGGGGATAAGTGGAGTTAGAGTAAAATTTTAAGTTCTCAATCAGATATTTTACTATAAAAT
TATGAAAGGGGAAAGTGGTA

Downstream 100 bases:

>100_bases
TTTAAGTAAGCAGCACCTTACTAAAATAAGGTGCTGCAATTATGATTTTTTAAGGTTGAAGGGAAGGATGTATTTATGGA
AGCTAAAATGACTATGAAAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSKKLISIFVLTIFVLATVLAGCSSSKNNTSSANETNTQKQETAKPVTIKLGMWSSSPAEKKIVDDQIAKFKEKYPNIDV
QIETIVGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPLDDYIKKYNVDVNDFEPALLSAFQWDGKTYGLPKDF
NTLALFYNKDMFKAAGINEPPKTWEELRDVAKKLTKDGVKGLVLSADLARFDAFINQNGGSVYQDGKVTLNLPENAQALD
FYVSLITKDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKQKSTMAFTVAYVMNKNS
KHKDEAFKLIEFLTGKEGQQFVVDSGLALPSRKSMQEGFKEKYPERAAFVDGASYAVPWQFGLYGTKVVDAANKACEALI
MKQISSAQQALDNAQKEVGQ

Sequences:

>Translated_420_residues
MSKKLISIFVLTIFVLATVLAGCSSSKNNTSSANETNTQKQETAKPVTIKLGMWSSSPAEKKIVDDQIAKFKEKYPNIDV
QIETIVGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPLDDYIKKYNVDVNDFEPALLSAFQWDGKTYGLPKDF
NTLALFYNKDMFKAAGINEPPKTWEELRDVAKKLTKDGVKGLVLSADLARFDAFINQNGGSVYQDGKVTLNLPENAQALD
FYVSLITKDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKQKSTMAFTVAYVMNKNS
KHKDEAFKLIEFLTGKEGQQFVVDSGLALPSRKSMQEGFKEKYPERAAFVDGASYAVPWQFGLYGTKVVDAANKACEALI
MKQISSAQQALDNAQKEVGQ
>Mature_419_residues
SKKLISIFVLTIFVLATVLAGCSSSKNNTSSANETNTQKQETAKPVTIKLGMWSSSPAEKKIVDDQIAKFKEKYPNIDVQ
IETIVGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPLDDYIKKYNVDVNDFEPALLSAFQWDGKTYGLPKDFN
TLALFYNKDMFKAAGINEPPKTWEELRDVAKKLTKDGVKGLVLSADLARFDAFINQNGGSVYQDGKVTLNLPENAQALDF
YVSLITKDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKQKSTMAFTVAYVMNKNSK
HKDEAFKLIEFLTGKEGQQFVVDSGLALPSRKSMQEGFKEKYPERAAFVDGASYAVPWQFGLYGTKVVDAANKACEALIM
KQISSAQQALDNAQKEVGQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=348, Percent_Identity=26.7241379310345, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787569, Length=370, Percent_Identity=25.1351351351351, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46247; Mature: 46116

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLISIFVLTIFVLATVLAGCSSSKNNTSSANETNTQKQETAKPVTIKLGMWSSSPAE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCHH
KKIVDDQIAKFKEKYPNIDVQIETIVGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSG
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCC
VLEPLDDYIKKYNVDVNDFEPALLSAFQWDGKTYGLPKDFNTLALFYNKDMFKAAGINEP
CCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCC
PKTWEELRDVAKKLTKDGVKGLVLSADLARFDAFINQNGGSVYQDGKVTLNLPENAQALD
HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCHHHH
FYVSLITKDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELP
HHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHEEECCCEECCHHHHCCCCCCCCHHHCC
AGKQKSTMAFTVAYVMNKNSKHKDEAFKLIEFLTGKEGQQFVVDSGLALPSRKSMQEGFK
CCCCCCHHHEEEEEHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
EKYPERAAFVDGASYAVPWQFGLYGTKVVDAANKACEALIMKQISSAQQALDNAQKEVGQ
HHCCCHHEEECCCCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKLISIFVLTIFVLATVLAGCSSSKNNTSSANETNTQKQETAKPVTIKLGMWSSSPAE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCHH
KKIVDDQIAKFKEKYPNIDVQIETIVGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSG
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCC
VLEPLDDYIKKYNVDVNDFEPALLSAFQWDGKTYGLPKDFNTLALFYNKDMFKAAGINEP
CCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCC
PKTWEELRDVAKKLTKDGVKGLVLSADLARFDAFINQNGGSVYQDGKVTLNLPENAQALD
HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCHHHH
FYVSLITKDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELP
HHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHEEECCCEECCHHHHCCCCCCCCHHHCC
AGKQKSTMAFTVAYVMNKNSKHKDEAFKLIEFLTGKEGQQFVVDSGLALPSRKSMQEGFK
CCCCCCHHHEEEEEHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
EKYPERAAFVDGASYAVPWQFGLYGTKVVDAANKACEALIMKQISSAQQALDNAQKEVGQ
HHCCCHHEEECCCCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA