| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040811
Identifier: 167040811
GI number: 167040811
Start: 2186981
End: 2187628
Strand: Reverse
Name: 167040811
Synonym: Teth514_2188
Alternate gene names: NA
Gene position: 2187628-2186981 (Counterclockwise)
Preceding gene: 167040812
Following gene: 167040810
Centisome position: 89.03
GC content: 34.88
Gene sequence:
>648_bases ATGGCAGGCAACTTTTTGGAGAACAATGTAGTTGTAGTGGTAGGGAAAATTTTTACTGATTTAGAGTACAGTCATGAACT ATATGGAGAAGAATTTTTTAATTTTATTTTGGAAGTTCCAAGATTGAGTGAAACGAAAGATTATCTTCCTGTTACTATTT CTAACCGTTTATTTGAAGGTATGAATTTACAGGTAGGTACCAGGGTAAAGATTGAAGGGCAATTGAGGTCATACAATAGA AAATCTCCAGAAGAAGGGAAAAATAAGTTGATTTTGACCATATTTGCTCGAGACATAAGGGTATTGTCGGAAGATGAAGT AGTAAAAAATCCGAATGAAATTTTTTTGGATGGCTTTATTTGTAAAAAACCAGTTTATAGAACTACTCCCTTTGGGAGAG AGATAACTGATTTATTAATTGCGGTAAATAGGCCTTATAACAAATCTGATTACATACCTGTCATAGCGTGGGGAAGAAAT GCAAGGTTTTCTGAAAAGTTAGAAATAGGAGATCGTATACGTTTATGGGGAAGAGTGCAGAGTAGGGAATACCAAAAAAA ACTGGGCGATGAAGTGGTTACAAAGGTCGCTTATGAGGTTTCTATTACGAGGATGGAAGTGGTTGAAAAAGAATTACAAA AGAGTTAG
Upstream 100 bases:
>100_bases AGATAATTTTAACGATTACTTTTGCCACCTGTCATAAATGCTTTCTAATTTTAATATATATTTTTAGAAGGACACATAAG GGGAAGGGGAGAGTGAACAC
Downstream 100 bases:
>100_bases AATGGAAATAACAGAGGACACAAGGGGGAATGAGTTTTGGAGAGAGGACTTATACAAGTTTATACTGGAGATGGCAAAGG AAAGACGACGGCTTCTATTG
Product: single-stranded DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MAGNFLENNVVVVVGKIFTDLEYSHELYGEEFFNFILEVPRLSETKDYLPVTISNRLFEGMNLQVGTRVKIEGQLRSYNR KSPEEGKNKLILTIFARDIRVLSEDEVVKNPNEIFLDGFICKKPVYRTTPFGREITDLLIAVNRPYNKSDYIPVIAWGRN ARFSEKLEIGDRIRLWGRVQSREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKS
Sequences:
>Translated_215_residues MAGNFLENNVVVVVGKIFTDLEYSHELYGEEFFNFILEVPRLSETKDYLPVTISNRLFEGMNLQVGTRVKIEGQLRSYNR KSPEEGKNKLILTIFARDIRVLSEDEVVKNPNEIFLDGFICKKPVYRTTPFGREITDLLIAVNRPYNKSDYIPVIAWGRN ARFSEKLEIGDRIRLWGRVQSREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKS >Mature_214_residues AGNFLENNVVVVVGKIFTDLEYSHELYGEEFFNFILEVPRLSETKDYLPVTISNRLFEGMNLQVGTRVKIEGQLRSYNRK SPEEGKNKLILTIFARDIRVLSEDEVVKNPNEIFLDGFICKKPVYRTTPFGREITDLLIAVNRPYNKSDYIPVIAWGRNA RFSEKLEIGDRIRLWGRVQSREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKS
Specific function: Unknown
COG id: COG0629
COG function: function code L; Single-stranded DNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25003; Mature: 24872
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS50935 SSB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNFLENNVVVVVGKIFTDLEYSHELYGEEFFNFILEVPRLSETKDYLPVTISNRLFEG CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCC MNLQVGTRVKIEGQLRSYNRKSPEEGKNKLILTIFARDIRVLSEDEVVKNPNEIFLDGFI CCEEECCEEEEECHHHCCCCCCCCCCCCCEEEEEEECHHHHCCCCCHHCCCCEEEEECEE CKKPVYRTTPFGREITDLLIAVNRPYNKSDYIPVIAWGRNARFSEKLEIGDRIRLWGRVQ CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCHHHCCCCEEEEEECHH SREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGNFLENNVVVVVGKIFTDLEYSHELYGEEFFNFILEVPRLSETKDYLPVTISNRLFEG CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCC MNLQVGTRVKIEGQLRSYNRKSPEEGKNKLILTIFARDIRVLSEDEVVKNPNEIFLDGFI CCEEECCEEEEECHHHCCCCCCCCCCCCCEEEEEEECHHHHCCCCCHHCCCCEEEEECEE CKKPVYRTTPFGREITDLLIAVNRPYNKSDYIPVIAWGRNARFSEKLEIGDRIRLWGRVQ CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCHHHCCCCEEEEEECHH SREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA