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The map label for this gene is yebA [H]

Identifier: 167040796

GI number: 167040796

Start: 2171579

End: 2172484

Strand: Direct

Name: yebA [H]

Synonym: Teth514_2173

Alternate gene names: 167040796

Gene position: 2171579-2172484 (Clockwise)

Preceding gene: 167040791

Following gene: 167040797

Centisome position: 88.37

GC content: 34.99

Gene sequence:

>906_bases
ATGAAAAAGAGAAAAGAGAAATACCTCAATATTATGATTATACCTGATTCAACTCAGCAAATCAAAAGCTTTAAAATCTC
TATTCCCTTTATAAAAACAACGGTAACAGTAGCTTTTTTAATAATTATGGTTGCTACAGCTTTTTTAGTTTATTTTAGCA
AAACAACTTTTTACTTATACAGTGTGATAGCAGAAAAAGATAAAGAAATCGAGCAATTAACTTCCCTTATAGAAGAACAA
GACAAAAAAATAGCTACTTTAGACAAAAATGCTCAACTGGTCAATGAAAAAATTAAAGGCTTAAACGAATTAGAAGAAAA
AGTAAGACGCATGGTTGGATTATCAACTCCTACTACAAGCCGTGGCAGTATATCAAGAAGCACTAGATCCGATGCTAACA
TTTCCTTTGATAATGAAGCAACAGCCGAACTTATTTCACAAATAGATCAAAAAACACAAGATTTTCAAGACCTTATTACA
AAAGTGTCAACTAGACTTGATTATCTGGATTCAATACCCAGTGATTACCCAGTATATGGTACAATAACCTCCCTTTTTGG
AAGGAGAAAGTCTCCTTTTGGCTCTGGAACTGAATTTCATCCTGGAATGGACATATCTGTACCTACAGGAACTCCAGTAA
AAGCCGCTGGAAAAGGTAGAGTTACATATGCAGGATGGTTATCAGGATATGGTAAGGTAGTAATTATAGACCACGGTTAT
GGAATTCAGTCCGTATATGGCCATAATTCTGAAATTCTTGTTAAAGTAGGCCAAAGTGTAAAAAGAGGCGATATAATAGC
AAAGTCGGGGAATACTGGAAGAAGTACTGGCCCTCATGTTCACTTTGAGGTTAGAGTAAATGGCAATCCCGTAGATCCAA
TGAAATATCTTGCAAAGGGGAATTGA

Upstream 100 bases:

>100_bases
TCATAACATTATAAAAATTTAAAATTTGATTTTTAGCAGGATTTTGATACCTTTGTATAGAATAAATATAGTTGTCCATT
TTTTAGGGTGGGGGGTACAA

Downstream 100 bases:

>100_bases
TATGTTTCAAAAAAGAGAACAGATTGTAGAAGTTAATCCTGACAAAATTGACACCGTCATAGGAAAAAATTCAACTTTTG
AAGGTACAATTAAATCCGAA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKKRKEKYLNIMIIPDSTQQIKSFKISIPFIKTTVTVAFLIIMVATAFLVYFSKTTFYLYSVIAEKDKEIEQLTSLIEEQ
DKKIATLDKNAQLVNEKIKGLNELEEKVRRMVGLSTPTTSRGSISRSTRSDANISFDNEATAELISQIDQKTQDFQDLIT
KVSTRLDYLDSIPSDYPVYGTITSLFGRRKSPFGSGTEFHPGMDISVPTGTPVKAAGKGRVTYAGWLSGYGKVVIIDHGY
GIQSVYGHNSEILVKVGQSVKRGDIIAKSGNTGRSTGPHVHFEVRVNGNPVDPMKYLAKGN

Sequences:

>Translated_301_residues
MKKRKEKYLNIMIIPDSTQQIKSFKISIPFIKTTVTVAFLIIMVATAFLVYFSKTTFYLYSVIAEKDKEIEQLTSLIEEQ
DKKIATLDKNAQLVNEKIKGLNELEEKVRRMVGLSTPTTSRGSISRSTRSDANISFDNEATAELISQIDQKTQDFQDLIT
KVSTRLDYLDSIPSDYPVYGTITSLFGRRKSPFGSGTEFHPGMDISVPTGTPVKAAGKGRVTYAGWLSGYGKVVIIDHGY
GIQSVYGHNSEILVKVGQSVKRGDIIAKSGNTGRSTGPHVHFEVRVNGNPVDPMKYLAKGN
>Mature_301_residues
MKKRKEKYLNIMIIPDSTQQIKSFKISIPFIKTTVTVAFLIIMVATAFLVYFSKTTFYLYSVIAEKDKEIEQLTSLIEEQ
DKKIATLDKNAQLVNEKIKGLNELEEKVRRMVGLSTPTTSRGSISRSTRSDANISFDNEATAELISQIDQKTQDFQDLIT
KVSTRLDYLDSIPSDYPVYGTITSLFGRRKSPFGSGTEFHPGMDISVPTGTPVKAAGKGRVTYAGWLSGYGKVVIIDHGY
GIQSVYGHNSEILVKVGQSVKRGDIIAKSGNTGRSTGPHVHFEVRVNGNPVDPMKYLAKGN

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=48.2456140350877, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI87082297, Length=124, Percent_Identity=39.5161290322581, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI87082174, Length=128, Percent_Identity=38.28125, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789099, Length=108, Percent_Identity=41.6666666666667, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33343; Mature: 33343

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRKEKYLNIMIIPDSTQQIKSFKISIPFIKTTVTVAFLIIMVATAFLVYFSKTTFYLY
CCCCCCCCEEEEEECCCHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIAEKDKEIEQLTSLIEEQDKKIATLDKNAQLVNEKIKGLNELEEKVRRMVGLSTPTTS
HHHHHCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
RGSISRSTRSDANISFDNEATAELISQIDQKTQDFQDLITKVSTRLDYLDSIPSDYPVYG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
TITSLFGRRKSPFGSGTEFHPGMDISVPTGTPVKAAGKGRVTYAGWLSGYGKVVIIDHGY
HHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEHHHCCCCEEEEEECCC
GIQSVYGHNSEILVKVGQSVKRGDIIAKSGNTGRSTGPHVHFEVRVNGNPVDPMKYLAKG
CCHHHHCCCCEEEEEECCCHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHCC
N
C
>Mature Secondary Structure
MKKRKEKYLNIMIIPDSTQQIKSFKISIPFIKTTVTVAFLIIMVATAFLVYFSKTTFYLY
CCCCCCCCEEEEEECCCHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIAEKDKEIEQLTSLIEEQDKKIATLDKNAQLVNEKIKGLNELEEKVRRMVGLSTPTTS
HHHHHCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
RGSISRSTRSDANISFDNEATAELISQIDQKTQDFQDLITKVSTRLDYLDSIPSDYPVYG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
TITSLFGRRKSPFGSGTEFHPGMDISVPTGTPVKAAGKGRVTYAGWLSGYGKVVIIDHGY
HHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEHHHCCCCEEEEEECCC
GIQSVYGHNSEILVKVGQSVKRGDIIAKSGNTGRSTGPHVHFEVRVNGNPVDPMKYLAKG
CCHHHHCCCCEEEEEECCCHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]