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The map label for this gene is rng [H]

Identifier: 167040744

GI number: 167040744

Start: 2126318

End: 2127742

Strand: Reverse

Name: rng [H]

Synonym: Teth514_2121

Alternate gene names: 167040744

Gene position: 2127742-2126318 (Counterclockwise)

Preceding gene: 167040745

Following gene: 167040741

Centisome position: 86.59

GC content: 33.33

Gene sequence:

>1425_bases
TTGAAAAGACTTATATTGGATATTGATGAAAATTTGAGCCAAATTGCTTTATTAGAAAATGGGAAGCTAAAGGAGTACCA
TCCAGAGAAAAGAGATGGAAAAAATATTTTGGGAAATATTTATAAAGGTAAGATTCAAAATGTTTTAAAAGGTATGCAGG
CAGCCTTTGTAGATATTGGAATTGGCAAGAACGCTTTTTTATTTTTTGACGATGTGCTTTTTCAACAAGAAAATTTACCC
AAAAGCATTACACAAGTTTTAAAACCAGGCCAACCAATAATGGTTCAAGTATCAAAAGAGGCAGTAGGCATGAAAAATCC
CAGAGTCACTGCTAATATTTCTTTGCCGGGGAAATATGTAGTTTTAATGCCTAATGTCGACTACATTGGAATTTCTCATA
GGATTGAAGAAGAAGTGGAGAGAAAGAGGCTTCAGGAAATTGTAAAAAAATTAAAACCTGAGGGTATAGGGATAATTGTC
AGAACAGCTGCGTTGGAGGCGACAGAACAGCAAATACGGGAGGATTTAGAAGAATTAATTCGCTTATATGAGAAAATACA
AAAAGATTTTCAAAATGCTCCCCTTCCTTCTTTGATATACAAAGAAGAGGATTTTGCAATTAAGTATTTGAGGGATTTGC
TTTCTGATGAGGTAGATGAAATTGTGGTAAACGACAAAGAAGAGTATGAGAACATAAAAAGATATTTAAAAAATGTAGGA
AAGGAAAATATTTCAGTTACTTATGAAGAAGGAGACTTACTGGGGATTTATGGAGCAGATTTTCAAGTTGATAAATTGTT
AGAAAAAAAGGTGTGGCTAAAAAGTGGGGGCTTTGTAATAATAGACCAAACAGAAGCTCTTACTGTAATTGATGTAAACA
CAGGAAAGTACGTAGGAAAATCTTCTTTAGAGGAGACAATATACAAGACCAATCTTGAAGCAGCTGAAGAAATTGCCCTG
CAGCTTAAGTTAAGGGATATTGGTGGAATAATTATTATTGATTTTATAGACATGAAAAATGAAAATTTTAAAAGGGATTT
GCTGGAGTTTTTCAAAAGAGAACTCCAAAAAGACAGGACAAAATGCACTGTATTAGGGTATACTCAATTAGGACTTGTTG
AGATGACAAGGAAAAGGGTGAGGTCGCAAGTAGGCTCATACCTTAAAGAAAAATGTCCTATATGTGAAGGAGAAGGGATG
GTTTATTCAACTGAGTACATCTACAGAAGATTAAGGAATAATATAGAGAGAGTGTTGCGGCATGTAAATGCGCGAAAAAT
CTACATAAAAGGGAATGATAAAGTTGTTAAAATCGCGTCAGAAAAAGGAATTATAAAATTTTACAAAGAGAAATTTAATG
TAGATCTCGAACTTGTTGTTGACAATAATAAAAAATATGGCCATTTTGAGATAGAATTTGAATGA

Upstream 100 bases:

>100_bases
TTAAAGGCTTTAAACGACTATTTAGGAAATTTATTTGATATAGACTCTTATAAACTTCACAGAAAAAATATGATTTTAGA
ATAAGTACGGGGTGAAAATT

Downstream 100 bases:

>100_bases
AGAATCAAATTTAAAAAAGCTGCCCAATGGAAATTTTTGGGCAGATTTATATCTACTTTTCTTTTTCATATTTTGCCACA
ATTCTCGTGGCTATTCCACC

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MKRLILDIDENLSQIALLENGKLKEYHPEKRDGKNILGNIYKGKIQNVLKGMQAAFVDIGIGKNAFLFFDDVLFQQENLP
KSITQVLKPGQPIMVQVSKEAVGMKNPRVTANISLPGKYVVLMPNVDYIGISHRIEEEVERKRLQEIVKKLKPEGIGIIV
RTAALEATEQQIREDLEELIRLYEKIQKDFQNAPLPSLIYKEEDFAIKYLRDLLSDEVDEIVVNDKEEYENIKRYLKNVG
KENISVTYEEGDLLGIYGADFQVDKLLEKKVWLKSGGFVIIDQTEALTVIDVNTGKYVGKSSLEETIYKTNLEAAEEIAL
QLKLRDIGGIIIIDFIDMKNENFKRDLLEFFKRELQKDRTKCTVLGYTQLGLVEMTRKRVRSQVGSYLKEKCPICEGEGM
VYSTEYIYRRLRNNIERVLRHVNARKIYIKGNDKVVKIASEKGIIKFYKEKFNVDLELVVDNNKKYGHFEIEFE

Sequences:

>Translated_474_residues
MKRLILDIDENLSQIALLENGKLKEYHPEKRDGKNILGNIYKGKIQNVLKGMQAAFVDIGIGKNAFLFFDDVLFQQENLP
KSITQVLKPGQPIMVQVSKEAVGMKNPRVTANISLPGKYVVLMPNVDYIGISHRIEEEVERKRLQEIVKKLKPEGIGIIV
RTAALEATEQQIREDLEELIRLYEKIQKDFQNAPLPSLIYKEEDFAIKYLRDLLSDEVDEIVVNDKEEYENIKRYLKNVG
KENISVTYEEGDLLGIYGADFQVDKLLEKKVWLKSGGFVIIDQTEALTVIDVNTGKYVGKSSLEETIYKTNLEAAEEIAL
QLKLRDIGGIIIIDFIDMKNENFKRDLLEFFKRELQKDRTKCTVLGYTQLGLVEMTRKRVRSQVGSYLKEKCPICEGEGM
VYSTEYIYRRLRNNIERVLRHVNARKIYIKGNDKVVKIASEKGIIKFYKEKFNVDLELVVDNNKKYGHFEIEFE
>Mature_474_residues
MKRLILDIDENLSQIALLENGKLKEYHPEKRDGKNILGNIYKGKIQNVLKGMQAAFVDIGIGKNAFLFFDDVLFQQENLP
KSITQVLKPGQPIMVQVSKEAVGMKNPRVTANISLPGKYVVLMPNVDYIGISHRIEEEVERKRLQEIVKKLKPEGIGIIV
RTAALEATEQQIREDLEELIRLYEKIQKDFQNAPLPSLIYKEEDFAIKYLRDLLSDEVDEIVVNDKEEYENIKRYLKNVG
KENISVTYEEGDLLGIYGADFQVDKLLEKKVWLKSGGFVIIDQTEALTVIDVNTGKYVGKSSLEETIYKTNLEAAEEIAL
QLKLRDIGGIIIIDFIDMKNENFKRDLLEFFKRELQKDRTKCTVLGYTQLGLVEMTRKRVRSQVGSYLKEKCPICEGEGM
VYSTEYIYRRLRNNIERVLRHVNARKIYIKGNDKVVKIASEKGIIKFYKEKFNVDLELVVDNNKKYGHFEIEFE

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=446, Percent_Identity=38.1165919282511, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI1787325, Length=422, Percent_Identity=34.3601895734597, Blast_Score=248, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 54776; Mature: 54776

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLILDIDENLSQIALLENGKLKEYHPEKRDGKNILGNIYKGKIQNVLKGMQAAFVDIG
CCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEC
IGKNAFLFFDDVLFQQENLPKSITQVLKPGQPIMVQVSKEAVGMKNPRVTANISLPGKYV
CCCCEEEEHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCEEEEEECCCEEE
VLMPNVDYIGISHRIEEEVERKRLQEIVKKLKPEGIGIIVRTAALEATEQQIREDLEELI
EEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
RLYEKIQKDFQNAPLPSLIYKEEDFAIKYLRDLLSDEVDEIVVNDKEEYENIKRYLKNVG
HHHHHHHHHHCCCCCCHHEECCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHCC
KENISVTYEEGDLLGIYGADFQVDKLLEKKVWLKSGGFVIIDQTEALTVIDVNTGKYVGK
CCCCEEEEECCCEEEEECCCCHHHHHHHHHHHEECCCEEEEECCCEEEEEECCCCCCCCH
SSLEETIYKTNLEAAEEIALQLKLRDIGGIIIIDFIDMKNENFKRDLLEFFKRELQKDRT
HHHHHHHHHCCHHHHHHHHEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCC
KCTVLGYTQLGLVEMTRKRVRSQVGSYLKEKCPICEGEGMVYSTEYIYRRLRNNIERVLR
EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
HVNARKIYIKGNDKVVKIASEKGIIKFYKEKFNVDLELVVDNNKKYGHFEIEFE
HCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MKRLILDIDENLSQIALLENGKLKEYHPEKRDGKNILGNIYKGKIQNVLKGMQAAFVDIG
CCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEC
IGKNAFLFFDDVLFQQENLPKSITQVLKPGQPIMVQVSKEAVGMKNPRVTANISLPGKYV
CCCCEEEEHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCEEEEEECCCEEE
VLMPNVDYIGISHRIEEEVERKRLQEIVKKLKPEGIGIIVRTAALEATEQQIREDLEELI
EEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
RLYEKIQKDFQNAPLPSLIYKEEDFAIKYLRDLLSDEVDEIVVNDKEEYENIKRYLKNVG
HHHHHHHHHHCCCCCCHHEECCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHCC
KENISVTYEEGDLLGIYGADFQVDKLLEKKVWLKSGGFVIIDQTEALTVIDVNTGKYVGK
CCCCEEEEECCCEEEEECCCCHHHHHHHHHHHEECCCEEEEECCCEEEEEECCCCCCCCH
SSLEETIYKTNLEAAEEIALQLKLRDIGGIIIIDFIDMKNENFKRDLLEFFKRELQKDRT
HHHHHHHHHCCHHHHHHHHEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCC
KCTVLGYTQLGLVEMTRKRVRSQVGSYLKEKCPICEGEGMVYSTEYIYRRLRNNIERVLR
EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
HVNARKIYIKGNDKVVKIASEKGIIKFYKEKFNVDLELVVDNNKKYGHFEIEFE
HCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]