| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is engD [H]
Identifier: 167040645
GI number: 167040645
Start: 2031885
End: 2032976
Strand: Direct
Name: engD [H]
Synonym: Teth514_2022
Alternate gene names: 167040645
Gene position: 2031885-2032976 (Clockwise)
Preceding gene: 167040599
Following gene: 167040662
Centisome position: 82.69
GC content: 35.07
Gene sequence:
>1092_bases ATGGAAATAGGAATTGTTGGACTACCTAATGTCGGCAAAAGCACTTTGTTTAACGCCATTACAAAAGCAGGGGCAGAATG TGCAAACTATCCTTTTTGTACTATTGAACCAAATGTGGGAATTGTAGCTGTACCAGATAAAAGGCTGGATTTTTTGGCAA AGATTGAAAATCCGCAAAAAGTTATACCCGCAACTATAAAATTTGTTGACATAGCAGGCCTTGTAAAAGGAGCAAGTAAA GGAGAGGGTTTAGGAAATAAATTTCTTTCTCATATTAGGGAAGTTGACGCTATATTAAACGTGGTAAGATGTTTTGAAGA TAGCAATATTGTCCATGTGGAAGGAAGTATTGATCCTATAAGAGATGTTGAAATAATAACTTTAGAGCTTATACTTGCTG ATATGGAAGTTGTCGAAAGGCGGCTTCAAAAAACATCAAAACTTGCGCGAAATGACAAAAAAGCAGCCTTTGAATTGGAA ATACTTGAAAAAATAAAAAAAGGATTGAATGAAGGGAAACCTGTAAGGGCTCTTCAATTTACCGAAGAAGAAAAAAGTTT TGTATGTCAACTTATGTTGCTTACCTCTAAACCCGTCATGTATGTAGCAAATATATCAGAAGAAGATTTAATTTCAGGAG AAGAAAATCAATATGTAAAGCAACTAAAAGAATATGCTGAAAAAGAAAATTCTCAAGTTTTGGTTATAAGTGCAAAAATT GAAGAAGAATTAGCTTCTTTAAGTGATGAAGAAAGAAATGAACTTTTGAGAGAATACGGCCTTGCCGAACCCGGCCTTAA CAACATAATAAGACATGGTTACTCTCTCCTTGGACTTATAACCTTTTTCACTGCTGGACCAAAAGAAGTCCACGCTTGGA CAATAAAAAAAGGCACAAAAGCACCTCAAGCAGCAGGGAAAATTCATTCAGATTTTGAAAAAGGATTTATAAGGGCAGAA GTAATCTCTTATGAAGATTTAGTAAAAGCCGGTTCACAGGCAACAGCAAGAGAAATGGGACTTATGAGACTGGAAGGAAA AGATTATGTGATGCAGGATGGAGATATAGTAGTATTTAGATTTAATGTATAA
Upstream 100 bases:
>100_bases AAAGTATTATACTAAATTATGGAATTTTTACGAAAAACATTTGAAAAAATTTTGTGAGTAATATATAATGCATATGTAAA ACTATTGGAGGGAAGATGAA
Downstream 100 bases:
>100_bases AAATCGCCTTTTAGGCGATTTTTATACATTACTCTTTTTTGTCTATCTTTGGTGTCTCCTCAACTTTATATCCTAAAGCA GCAATTAAATTATCCAATTT
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MEIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDKRLDFLAKIENPQKVIPATIKFVDIAGLVKGASK GEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPIRDVEIITLELILADMEVVERRLQKTSKLARNDKKAAFELE ILEKIKKGLNEGKPVRALQFTEEEKSFVCQLMLLTSKPVMYVANISEEDLISGEENQYVKQLKEYAEKENSQVLVISAKI EEELASLSDEERNELLREYGLAEPGLNNIIRHGYSLLGLITFFTAGPKEVHAWTIKKGTKAPQAAGKIHSDFEKGFIRAE VISYEDLVKAGSQATAREMGLMRLEGKDYVMQDGDIVVFRFNV
Sequences:
>Translated_363_residues MEIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDKRLDFLAKIENPQKVIPATIKFVDIAGLVKGASK GEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPIRDVEIITLELILADMEVVERRLQKTSKLARNDKKAAFELE ILEKIKKGLNEGKPVRALQFTEEEKSFVCQLMLLTSKPVMYVANISEEDLISGEENQYVKQLKEYAEKENSQVLVISAKI EEELASLSDEERNELLREYGLAEPGLNNIIRHGYSLLGLITFFTAGPKEVHAWTIKKGTKAPQAAGKIHSDFEKGFIRAE VISYEDLVKAGSQATAREMGLMRLEGKDYVMQDGDIVVFRFNV >Mature_363_residues MEIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDKRLDFLAKIENPQKVIPATIKFVDIAGLVKGASK GEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPIRDVEIITLELILADMEVVERRLQKTSKLARNDKKAAFELE ILEKIKKGLNEGKPVRALQFTEEEKSFVCQLMLLTSKPVMYVANISEEDLISGEENQYVKQLKEYAEKENSQVLVISAKI EEELASLSDEERNELLREYGLAEPGLNNIIRHGYSLLGLITFFTAGPKEVHAWTIKKGTKAPQAAGKIHSDFEKGFIRAE VISYEDLVKAGSQATAREMGLMRLEGKDYVMQDGDIVVFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=369, Percent_Identity=49.3224932249323, Blast_Score=348, Evalue=5e-96, Organism=Homo sapiens, GI58761502, Length=216, Percent_Identity=44.9074074074074, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI24308117, Length=99, Percent_Identity=38.3838383838384, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1787454, Length=364, Percent_Identity=56.5934065934066, Blast_Score=421, Evalue=1e-119, Organism=Escherichia coli, GI1789574, Length=129, Percent_Identity=32.5581395348837, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=44.5355191256831, Blast_Score=332, Evalue=2e-91, Organism=Saccharomyces cerevisiae, GI6319499, Length=370, Percent_Identity=44.0540540540541, Blast_Score=291, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6321773, Length=379, Percent_Identity=37.9947229551451, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321649, Length=157, Percent_Identity=39.4904458598726, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI24640873, Length=368, Percent_Identity=46.7391304347826, Blast_Score=327, Evalue=1e-89, Organism=Drosophila melanogaster, GI24640877, Length=368, Percent_Identity=46.7391304347826, Blast_Score=327, Evalue=1e-89, Organism=Drosophila melanogaster, GI24640875, Length=368, Percent_Identity=46.7391304347826, Blast_Score=327, Evalue=1e-89, Organism=Drosophila melanogaster, GI24640879, Length=327, Percent_Identity=45.2599388379205, Blast_Score=271, Evalue=6e-73, Organism=Drosophila melanogaster, GI24585318, Length=248, Percent_Identity=26.6129032258064, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 40312; Mature: 40312
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDKRLDFLAKIENPQK CCEEEEECCCCCHHHHHHHHHHHCHHHCCCCEEEECCCCCEEECCCHHHHHHHHCCCCCH VIPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC RDVEIITLELILADMEVVERRLQKTSKLARNDKKAAFELEILEKIKKGLNEGKPVRALQF CCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE TEEEKSFVCQLMLLTSKPVMYVANISEEDLISGEENQYVKQLKEYAEKENSQVLVISAKI CHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHH EEELASLSDEERNELLREYGLAEPGLNNIIRHGYSLLGLITFFTAGPKEVHAWTIKKGTK HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC APQAAGKIHSDFEKGFIRAEVISYEDLVKAGSQATAREMGLMRLEGKDYVMQDGDIVVFR CCHHHHHHHHHHHHCCHHHHHHCHHHHHHCCCHHHHHHHCCEEECCCCEEEECCCEEEEE FNV ECC >Mature Secondary Structure MEIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDKRLDFLAKIENPQK CCEEEEECCCCCHHHHHHHHHHHCHHHCCCCEEEECCCCCEEECCCHHHHHHHHCCCCCH VIPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC RDVEIITLELILADMEVVERRLQKTSKLARNDKKAAFELEILEKIKKGLNEGKPVRALQF CCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE TEEEKSFVCQLMLLTSKPVMYVANISEEDLISGEENQYVKQLKEYAEKENSQVLVISAKI CHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHH EEELASLSDEERNELLREYGLAEPGLNNIIRHGYSLLGLITFFTAGPKEVHAWTIKKGTK HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC APQAAGKIHSDFEKGFIRAEVISYEDLVKAGSQATAREMGLMRLEGKDYVMQDGDIVVFR CCHHHHHHHHHHHHCCHHHHHHCHHHHHHCCCHHHHHHHCCEEECCCCEEEECCCEEEEE FNV ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]