Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is yteA [H]

Identifier: 167040489

GI number: 167040489

Start: 1874902

End: 1875522

Strand: Reverse

Name: yteA [H]

Synonym: Teth514_1858

Alternate gene names: 167040489

Gene position: 1875522-1874902 (Counterclockwise)

Preceding gene: 167040490

Following gene: 167040487

Centisome position: 76.33

GC content: 32.05

Gene sequence:

>621_bases
ATGGATAGTGAAAAACTGGAACACTTTAGACAGTTACTGTTAAAAGAAAAGGAAAAGGTCTTAAGTACTATAAATCAAAT
GAATTTGAATGATGGTATAGGAGGGATTGCACAAAGAGAATATTATCAAGAACTTTCTCTTTTGGATAATCATCCGGCAG
ATTTTGCTTCTGAAGTTTATGAAGTAGAGAAAAATTATGCTCTCAAAGATAATGAAAAATATATTTTAAGGCAAATAGAA
GATGCTTTTAAAAGAATGGAAATAGGTACTTACGGCATATGTGCTCACTGTCATAAGCCAATTGAAGAAGAGCGTTTAGA
AGCCCTTCCTTATACTGTTCTTTGTGCAGAGTGTGCTAAAAATAATGATTTAGAACTTAAGGATTTAAAAAATTCAAGGC
CTAATGAAGAAAGAATGATAAAATACCCCTTTGGATGGGGGTATAAGGATTTAAAAGGTGAAATTCAATTTGATGCAGAG
GATTCTTATCAAGAAGTTGCACGGTTTAATAAGACGAAAAGTGGCTTGGACAATTATGACGATGTCTATGATGATGAAAA
TGCTGGCTATGTAGAAGAAACTGATAAAATAAGTAATGAGGATTATAAGAAGACATTATAA

Upstream 100 bases:

>100_bases
TCAAAAACTAGTGGTGTTAAATTTGCCTGTGATTGGCAGTATTATAGCGGATATAGTTAAGATTGTAAATCAAAAGCTAT
ATTAGATAGGAGTTGGTATA

Downstream 100 bases:

>100_bases
ATCTCCGGGAAACTGGAGATTTTTATTCACCTATAATTTTGACCAACACTCTCTTTTTTCTTTTTCCATCAAATTCACCG
TAGAAAATTTGTTCCCATGG

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: ORFQ [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVYEVEKNYALKDNEKYILRQIE
DAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAECAKNNDLELKDLKNSRPNEERMIKYPFGWGYKDLKGEIQFDAE
DSYQEVARFNKTKSGLDNYDDVYDDENAGYVEETDKISNEDYKKTL

Sequences:

>Translated_206_residues
MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVYEVEKNYALKDNEKYILRQIE
DAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAECAKNNDLELKDLKNSRPNEERMIKYPFGWGYKDLKGEIQFDAE
DSYQEVARFNKTKSGLDNYDDVYDDENAGYVEETDKISNEDYKKTL
>Mature_206_residues
MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVYEVEKNYALKDNEKYILRQIE
DAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAECAKNNDLELKDLKNSRPNEERMIKYPFGWGYKDLKGEIQFDAE
DSYQEVARFNKTKSGLDNYDDVYDDENAGYVEETDKISNEDYKKTL

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014240
- InterPro:   IPR000962 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 24137; Mature: 24137

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
EVEKNYALKDNEKYILRQIEDAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAECAK
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHC
NNDLELKDLKNSRPNEERMIKYPFGWGYKDLKGEIQFDAEDSYQEVARFNKTKSGLDNYD
CCCCCHHHHHCCCCCHHCEEECCCCCCHHHCCCCEEECCCHHHHHHHHHHHHHCCCCCCH
DVYDDENAGYVEETDKISNEDYKKTL
HHCCCCCCCCCHHHHHCCCCHHHHCC
>Mature Secondary Structure
MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
EVEKNYALKDNEKYILRQIEDAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAECAK
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHC
NNDLELKDLKNSRPNEERMIKYPFGWGYKDLKGEIQFDAEDSYQEVARFNKTKSGLDNYD
CCCCCHHHHHCCCCCHHCEEECCCCCCHHHCCCCEEECCCHHHHHHHHHHHHHCCCCCCH
DVYDDENAGYVEETDKISNEDYKKTL
HHCCCCCCCCCHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 10568751 [H]