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The map label for this gene is 167040470

Identifier: 167040470

GI number: 167040470

Start: 1858210

End: 1859499

Strand: Reverse

Name: 167040470

Synonym: Teth514_1838

Alternate gene names: NA

Gene position: 1859499-1858210 (Counterclockwise)

Preceding gene: 167040471

Following gene: 167040469

Centisome position: 75.67

GC content: 27.21

Gene sequence:

>1290_bases
ATGACTATTAAGTTTTTTTCATTTCTTGGCACAGGAGCTTATACTAAGTGTAAATATAAATTTGATAATATTGAAAGTGA
CAGTAGTTGCTATGTACAGGAAGCTCTTATTGATATTTTATTAAAAAAGAATGTTGATTTAGAAAGCATATTTATATTTA
AAACTGAAGAGGCTACTAATGCAAATTGGTCTAAAAATAAGAAATATCCAAGTGATCCTGGTTTAAAACAGGTTTTAGAC
AAATATAAGGGCAAACCAAGTATTAATTATGTTGATATACCCTCAGGACAAAATGAAAATGAACTTTGGGAAATATTTGA
TAAAGTTTTAGAACAAATAGATAAAGGAGATGAAATAATATTTGATATTACACATTCATTCTGCTCAATTCCAATGCTGG
CACTAATTATCTTAAATTATGCTAAATTTATTAAAAAATGCGAAATAAAAGGTATATATTATGGAGCAATAGAAGCAGTT
GGTAAGGAAATAAAAGATATTGAAGAATCAGATATAGCTCCTATATTTGACCTAACACCTTTTGTAAGACTACTTGATTG
GACCGTAGGAATTGATCGGTTTATAGAAACAGGTGATGCTAGGTACATAAATTATTTAATGAAATTAGGCACTAAAGAGT
TACACCTTAAAGGTATGAAAGATGAAAGAAATATATTAAGTAACTTTGCTCAAAAGTTAGAAAACTACACAAGAAATGTT
GCTACATGTAGAGGCAAAGAAATTTCTAAGGGTGGATTAGAACTGAAGAATATACTTGGAGATGCTGTAAGCATAGCAGA
TAAGACATATATTAAGCCGATGAAACCAGTAATAGATAGGTTAAACGATAGATTTATAAACTTTAGTAATGATGAAAATA
AAAACATGATTGAAATAGTCAAATGGTGCAGTGAACATAATCTTATACAGCAGGGCTTTACTATACTTGAAGAGGGAATT
GTAAACTTTTTTTGTGAAAAATTTGGATTTGATAAAAATAATATAAAAGAACGCGAAATAATTGAAAATGCTACATATAT
TAAACATTATTCTTTACCAAAAGATAGATGGAAAAAAACAGCATTTGAAAACGAAGCTGTAATTTATAACCTTTTAAGTA
AGCTTAATGAAGAAAATTATAAAAATTTGATTAAAGTATTATATGAAGAAATTAAACCTTTGCGTAATGATATTAACCAT
GCTGGGTATAAGGAAAATGATATGAAAGCTGAAAAGTTTGAAGATAAATTAAATGAATTAATAAATAAGGTAGAAAAATA
TATAGTTTAA

Upstream 100 bases:

>100_bases
AAAGAGAAGTTATTACTGAGATTAAAAATGGTGAAAACATAAAAGTAAGTAGATTATTCACCCATGTAAGATTTAGAAAA
TATGAGAGGTGGACATAGAA

Downstream 100 bases:

>100_bases
ATTTGAAGTTCTAAAAATTAAGATACTATTTTTGTTTAAGGGGGATTAAAACTATGAATACAAAAGTCTTAGTATTAATT
ATAGGGACAAATCCATTGCC

Product: CRISPR-associated TM1812 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTIKFFSFLGTGAYTKCKYKFDNIESDSSCYVQEALIDILLKKNVDLESIFIFKTEEATNANWSKNKKYPSDPGLKQVLD
KYKGKPSINYVDIPSGQNENELWEIFDKVLEQIDKGDEIIFDITHSFCSIPMLALIILNYAKFIKKCEIKGIYYGAIEAV
GKEIKDIEESDIAPIFDLTPFVRLLDWTVGIDRFIETGDARYINYLMKLGTKELHLKGMKDERNILSNFAQKLENYTRNV
ATCRGKEISKGGLELKNILGDAVSIADKTYIKPMKPVIDRLNDRFINFSNDENKNMIEIVKWCSEHNLIQQGFTILEEGI
VNFFCEKFGFDKNNIKEREIIENATYIKHYSLPKDRWKKTAFENEAVIYNLLSKLNEENYKNLIKVLYEEIKPLRNDINH
AGYKENDMKAEKFEDKLNELINKVEKYIV

Sequences:

>Translated_429_residues
MTIKFFSFLGTGAYTKCKYKFDNIESDSSCYVQEALIDILLKKNVDLESIFIFKTEEATNANWSKNKKYPSDPGLKQVLD
KYKGKPSINYVDIPSGQNENELWEIFDKVLEQIDKGDEIIFDITHSFCSIPMLALIILNYAKFIKKCEIKGIYYGAIEAV
GKEIKDIEESDIAPIFDLTPFVRLLDWTVGIDRFIETGDARYINYLMKLGTKELHLKGMKDERNILSNFAQKLENYTRNV
ATCRGKEISKGGLELKNILGDAVSIADKTYIKPMKPVIDRLNDRFINFSNDENKNMIEIVKWCSEHNLIQQGFTILEEGI
VNFFCEKFGFDKNNIKEREIIENATYIKHYSLPKDRWKKTAFENEAVIYNLLSKLNEENYKNLIKVLYEEIKPLRNDINH
AGYKENDMKAEKFEDKLNELINKVEKYIV
>Mature_428_residues
TIKFFSFLGTGAYTKCKYKFDNIESDSSCYVQEALIDILLKKNVDLESIFIFKTEEATNANWSKNKKYPSDPGLKQVLDK
YKGKPSINYVDIPSGQNENELWEIFDKVLEQIDKGDEIIFDITHSFCSIPMLALIILNYAKFIKKCEIKGIYYGAIEAVG
KEIKDIEESDIAPIFDLTPFVRLLDWTVGIDRFIETGDARYINYLMKLGTKELHLKGMKDERNILSNFAQKLENYTRNVA
TCRGKEISKGGLELKNILGDAVSIADKTYIKPMKPVIDRLNDRFINFSNDENKNMIEIVKWCSEHNLIQQGFTILEEGIV
NFFCEKFGFDKNNIKEREIIENATYIKHYSLPKDRWKKTAFENEAVIYNLLSKLNEENYKNLIKVLYEEIKPLRNDINHA
GYKENDMKAEKFEDKLNELINKVEKYIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013383
- InterPro:   IPR011742 [H]

Pfam domain/function: PF09530 Cas_TM1812 [H]

EC number: NA

Molecular weight: Translated: 49907; Mature: 49776

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKFFSFLGTGAYTKCKYKFDNIESDSSCYVQEALIDILLKKNVDLESIFIFKTEEATN
CEEEEEHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
ANWSKNKKYPSDPGLKQVLDKYKGKPSINYVDIPSGQNENELWEIFDKVLEQIDKGDEII
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
FDITHSFCSIPMLALIILNYAKFIKKCEIKGIYYGAIEAVGKEIKDIEESDIAPIFDLTP
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
FVRLLDWTVGIDRFIETGDARYINYLMKLGTKELHLKGMKDERNILSNFAQKLENYTRNV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ATCRGKEISKGGLELKNILGDAVSIADKTYIKPMKPVIDRLNDRFINFSNDENKNMIEIV
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCEECCCCCCCCHHHHHH
KWCSEHNLIQQGFTILEEGIVNFFCEKFGFDKNNIKEREIIENATYIKHYSLPKDRWKKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
AFENEAVIYNLLSKLNEENYKNLIKVLYEEIKPLRNDINHAGYKENDMKAEKFEDKLNEL
HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
INKVEKYIV
HHHHHHHCC
>Mature Secondary Structure 
TIKFFSFLGTGAYTKCKYKFDNIESDSSCYVQEALIDILLKKNVDLESIFIFKTEEATN
EEEEEHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
ANWSKNKKYPSDPGLKQVLDKYKGKPSINYVDIPSGQNENELWEIFDKVLEQIDKGDEII
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
FDITHSFCSIPMLALIILNYAKFIKKCEIKGIYYGAIEAVGKEIKDIEESDIAPIFDLTP
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
FVRLLDWTVGIDRFIETGDARYINYLMKLGTKELHLKGMKDERNILSNFAQKLENYTRNV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ATCRGKEISKGGLELKNILGDAVSIADKTYIKPMKPVIDRLNDRFINFSNDENKNMIEIV
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCEECCCCCCCCHHHHHH
KWCSEHNLIQQGFTILEEGIVNFFCEKFGFDKNNIKEREIIENATYIKHYSLPKDRWKKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
AFENEAVIYNLLSKLNEENYKNLIKVLYEEIKPLRNDINHAGYKENDMKAEKFEDKLNEL
HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
INKVEKYIV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]