| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040426
Identifier: 167040426
GI number: 167040426
Start: 1799896
End: 1801779
Strand: Reverse
Name: 167040426
Synonym: Teth514_1790
Alternate gene names: NA
Gene position: 1801779-1799896 (Counterclockwise)
Preceding gene: 167040427
Following gene: 167040425
Centisome position: 73.32
GC content: 34.71
Gene sequence:
>1884_bases ATGGCAAAATTTGCAGATGAATTTATAATAGGAGCTAATTATTGGCCAAGAAATCACGGCATTGAAATGTGGAAAGAGTG GAATTATGATGAGATAAAAAGTGAATTTATTGAGGCGAAAAGCTTAGGCATTAATGTAATGAGAATAAATCTTTTTTGGG AGGATTTCCAGCCAAAGCCTGATGTAATATCAGAGGAAGCGGTGAAAAAGTTTGACGAGCTTATTAAGATATGTCATGAA GTCGATATGAAAATCGCGCCTACTTTTTTTGTGGGGCATATGAGCGGTGAGAATTGGGATGTGCCGTGGAGAGAAGGTAG GAATATATACAGTGATTCATTTATGTTGAGGTATCAAATTAAATTGGTACGCTTTTTTGCTGAGAGGTACAAAGATGAAT CTGCTATTTTGTTTTGGGACCTTTCAAATGAGCCAGATAATTATGTAAAAGCAGAGTCAAGACATGATGCTTGGCTGTGG AACTATGTCTTATCAAATGAGATAAAAAAATACGACAAAAATCATCCCGTAACGCTTGGAATACACCAGGCATCTCTTCT TACTGATAATAATTTTTATCCTGAAGACATGCAAGAAGGCAACGATTTTCTATGTATGCACGCATATCCAATTTATACAG ATACATGTATAGACCCTGTAAATTCTATAAGAAGCACTTATATGGCACCTTTTGCTTCTAAACTCACCCAAGCTATGGGT GGCAAAGAAGTGCTACTGGAGGAATTTGGTGCAACTACACTTATGATGAGTGAAGATATAGAGGGAGATTATTACAAGGT GGTTCTGTATAGCCTTCTTGCGAATGAATCGATAGGTGCAATAGCCTGGTGCTTTGGAGATTTTTCTGTTGGCGAAAGGC TTCCCTATAATTCTACCCCCTTTGAAACGCAATTTGGTATAACAGCAGTTGATGGAAGAGTTAAAAAAGCAGGACTTGAA ATAAAAGCTTATTCTGAATTTATGAATAGAATTGAGTATAAGGACTTAAAACACAAAAAGTGCGATGCCGCGATAATCAT TCCGGATAAGTATTATAGTGCTTTATTTGTAGGTAACGATTATACTCCAGAGAGAAATTTTAGGATTCTTTTAAATAGTT TTATACTGGCAAAGGAAGCAGGTATAGACGTTGAATTGGCAAGAGCTGATGGAGATTTTAGTAAGTATAAAATGCTTATA CTGCCTTCCGCTTATAGAAAAGGGCATTTAAATTATGACCAATGGGTAAAAATTATGGATTTTGTTAAAAATGGTGGCAC TTTGTATGTATCATACGATGGAATTTCTTTAGAAGGTTTTGATGAGGTTTTTGGAGTTAAAACGCAATATTCTATGGTGC CCAAAAATGAGACAGTATCAATGCATTGTGAAGAACTTGGAATTGATTTAAATTATAAAGCTCTTAAATTTAATAAAAGA CTTATTGCAAAACCGACAACGGGCCGTGTAATTGCAAATGATGATGAGAATAACCCGGCAATAGTTGTGAATAAATATGG CGAAGGGAATGCTATTCTTGTTACGTATCCTATTGAGCTCTATTTAAGTTATATGCCCGATGTATATAAGACTGACAGGT CTTATTTGATTTATAAGTATGCTAAAGAGCTGAGCGGAATAGAATACAACGTAAAAGTAGAATCTCCTTATATTGAAGTA AAAGAGTTTGATTATGGCGGGAAAACCCTTGTGCTCTTTATAAATCATGAAGACATAGATATTCATACTAAAATAAGAAT AAGTAGAAAAACAAAAAATAATGAGAAAATACAAGATTTAATTAGCGGAAGACAGATTAATTTAGAAAATTTCACAATAG AGGCTAATGGAGTAGTTGCAATTTTGCTGGAAAAGGGGTTATAA
Upstream 100 bases:
>100_bases GTTAGTATTAGTGGTGTTATCATTGGGATTTTCTGTTTTCACTATATTATTGATACTTTTATATGAGAAAAAGAAAAAAT AGTACGACGGAGGTAGAAAA
Downstream 100 bases:
>100_bases AGATGTTCAGGCTAACAAGACTTAGTAACAAACCTATATTGTCGCCAATAAAAGAGCATGAATGGGAAAAGGAGGCTGTT TTTAATGCAGCAGTAATTTA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-Galactosidase Trimerisation Domain Protein; Glycoside Hydrolase Family Protein; Beta-Galactosidase; Mannan Endo-1 4-Beta-Mannosidase; Glycosy Hydrolase Family Protein; Glycosidase; Endo-Beta 1 4-Mannanase; Endo-Beta-Mannanase-Like Protein
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MAKFADEFIIGANYWPRNHGIEMWKEWNYDEIKSEFIEAKSLGINVMRINLFWEDFQPKPDVISEEAVKKFDELIKICHE VDMKIAPTFFVGHMSGENWDVPWREGRNIYSDSFMLRYQIKLVRFFAERYKDESAILFWDLSNEPDNYVKAESRHDAWLW NYVLSNEIKKYDKNHPVTLGIHQASLLTDNNFYPEDMQEGNDFLCMHAYPIYTDTCIDPVNSIRSTYMAPFASKLTQAMG GKEVLLEEFGATTLMMSEDIEGDYYKVVLYSLLANESIGAIAWCFGDFSVGERLPYNSTPFETQFGITAVDGRVKKAGLE IKAYSEFMNRIEYKDLKHKKCDAAIIIPDKYYSALFVGNDYTPERNFRILLNSFILAKEAGIDVELARADGDFSKYKMLI LPSAYRKGHLNYDQWVKIMDFVKNGGTLYVSYDGISLEGFDEVFGVKTQYSMVPKNETVSMHCEELGIDLNYKALKFNKR LIAKPTTGRVIANDDENNPAIVVNKYGEGNAILVTYPIELYLSYMPDVYKTDRSYLIYKYAKELSGIEYNVKVESPYIEV KEFDYGGKTLVLFINHEDIDIHTKIRISRKTKNNEKIQDLISGRQINLENFTIEANGVVAILLEKGL
Sequences:
>Translated_627_residues MAKFADEFIIGANYWPRNHGIEMWKEWNYDEIKSEFIEAKSLGINVMRINLFWEDFQPKPDVISEEAVKKFDELIKICHE VDMKIAPTFFVGHMSGENWDVPWREGRNIYSDSFMLRYQIKLVRFFAERYKDESAILFWDLSNEPDNYVKAESRHDAWLW NYVLSNEIKKYDKNHPVTLGIHQASLLTDNNFYPEDMQEGNDFLCMHAYPIYTDTCIDPVNSIRSTYMAPFASKLTQAMG GKEVLLEEFGATTLMMSEDIEGDYYKVVLYSLLANESIGAIAWCFGDFSVGERLPYNSTPFETQFGITAVDGRVKKAGLE IKAYSEFMNRIEYKDLKHKKCDAAIIIPDKYYSALFVGNDYTPERNFRILLNSFILAKEAGIDVELARADGDFSKYKMLI LPSAYRKGHLNYDQWVKIMDFVKNGGTLYVSYDGISLEGFDEVFGVKTQYSMVPKNETVSMHCEELGIDLNYKALKFNKR LIAKPTTGRVIANDDENNPAIVVNKYGEGNAILVTYPIELYLSYMPDVYKTDRSYLIYKYAKELSGIEYNVKVESPYIEV KEFDYGGKTLVLFINHEDIDIHTKIRISRKTKNNEKIQDLISGRQINLENFTIEANGVVAILLEKGL >Mature_626_residues AKFADEFIIGANYWPRNHGIEMWKEWNYDEIKSEFIEAKSLGINVMRINLFWEDFQPKPDVISEEAVKKFDELIKICHEV DMKIAPTFFVGHMSGENWDVPWREGRNIYSDSFMLRYQIKLVRFFAERYKDESAILFWDLSNEPDNYVKAESRHDAWLWN YVLSNEIKKYDKNHPVTLGIHQASLLTDNNFYPEDMQEGNDFLCMHAYPIYTDTCIDPVNSIRSTYMAPFASKLTQAMGG KEVLLEEFGATTLMMSEDIEGDYYKVVLYSLLANESIGAIAWCFGDFSVGERLPYNSTPFETQFGITAVDGRVKKAGLEI KAYSEFMNRIEYKDLKHKKCDAAIIIPDKYYSALFVGNDYTPERNFRILLNSFILAKEAGIDVELARADGDFSKYKMLIL PSAYRKGHLNYDQWVKIMDFVKNGGTLYVSYDGISLEGFDEVFGVKTQYSMVPKNETVSMHCEELGIDLNYKALKFNKRL IAKPTTGRVIANDDENNPAIVVNKYGEGNAILVTYPIELYLSYMPDVYKTDRSYLIYKYAKELSGIEYNVKVESPYIEVK EFDYGGKTLVLFINHEDIDIHTKIRISRKTKNNEKIQDLISGRQINLENFTIEANGVVAILLEKGL
Specific function: Unknown
COG id: COG3934
COG function: function code G; Endo-beta-mannanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.23
Molecular weight: Translated: 72436; Mature: 72305
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFADEFIIGANYWPRNHGIEMWKEWNYDEIKSEFIEAKSLGINVMRINLFWEDFQPKP CCCCCCCEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCC DVISEEAVKKFDELIKICHEVDMKIAPTFFVGHMSGENWDVPWREGRNIYSDSFMLRYQI CCCCHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCCHHCCCCCCCCCEEEEHHH KLVRFFAERYKDESAILFWDLSNEPDNYVKAESRHDAWLWNYVLSNEIKKYDKNHPVTLG HHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCCCCCEEHHHHHHHHHHHHCCCCCEEEE IHQASLLTDNNFYPEDMQEGNDFLCMHAYPIYTDTCIDPVNSIRSTYMAPFASKLTQAMG EEEEEEEECCCCCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GKEVLLEEFGATTLMMSEDIEGDYYKVVLYSLLANESIGAIAWCFGDFSVGERLPYNSTP CHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC FETQFGITAVDGRVKKAGLEIKAYSEFMNRIEYKDLKHKKCDAAIIIPDKYYSALFVGND CCCCCCEEEECCEEHHCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCC YTPERNFRILLNSFILAKEAGIDVELARADGDFSKYKMLILPSAYRKGHLNYDQWVKIMD CCCCCCCEEEEEHHHEEECCCCCEEEEECCCCHHHEEEEEEECHHHCCCCCHHHHHHHHH FVKNGGTLYVSYDGISLEGFDEVFGVKTQYSMVPKNETVSMHCEELGIDLNYKALKFNKR HHHCCCEEEEEECCEEECCCHHHHCCCEEEEECCCCCEEEEEHHHHCCCCCEEEEEECCE LIAKPTTGRVIANDDENNPAIVVNKYGEGNAILVTYPIELYLSYMPDVYKTDRSYLIYKY EEECCCCCCEEECCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHCCCHHHCCCCEEEEEE AKELSGIEYNVKVESPYIEVKEFDYGGKTLVLFINHEDIDIHTKIRISRKTKNNEKIQDL HHHHCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHH ISGRQINLENFTIEANGVVAILLEKGL HCCCEEEEEEEEEECCCEEEEEEECCC >Mature Secondary Structure AKFADEFIIGANYWPRNHGIEMWKEWNYDEIKSEFIEAKSLGINVMRINLFWEDFQPKP CCCCCCEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCC DVISEEAVKKFDELIKICHEVDMKIAPTFFVGHMSGENWDVPWREGRNIYSDSFMLRYQI CCCCHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCCHHCCCCCCCCCEEEEHHH KLVRFFAERYKDESAILFWDLSNEPDNYVKAESRHDAWLWNYVLSNEIKKYDKNHPVTLG HHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCCCCCEEHHHHHHHHHHHHCCCCCEEEE IHQASLLTDNNFYPEDMQEGNDFLCMHAYPIYTDTCIDPVNSIRSTYMAPFASKLTQAMG EEEEEEEECCCCCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GKEVLLEEFGATTLMMSEDIEGDYYKVVLYSLLANESIGAIAWCFGDFSVGERLPYNSTP CHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC FETQFGITAVDGRVKKAGLEIKAYSEFMNRIEYKDLKHKKCDAAIIIPDKYYSALFVGND CCCCCCEEEECCEEHHCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCC YTPERNFRILLNSFILAKEAGIDVELARADGDFSKYKMLILPSAYRKGHLNYDQWVKIMD CCCCCCCEEEEEHHHEEECCCCCEEEEECCCCHHHEEEEEEECHHHCCCCCHHHHHHHHH FVKNGGTLYVSYDGISLEGFDEVFGVKTQYSMVPKNETVSMHCEELGIDLNYKALKFNKR HHHCCCEEEEEECCEEECCCHHHHCCCEEEEECCCCCEEEEEHHHHCCCCCEEEEEECCE LIAKPTTGRVIANDDENNPAIVVNKYGEGNAILVTYPIELYLSYMPDVYKTDRSYLIYKY EEECCCCCCEEECCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHCCCHHHCCCCEEEEEE AKELSGIEYNVKVESPYIEVKEFDYGGKTLVLFINHEDIDIHTKIRISRKTKNNEKIQDL HHHHCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHH ISGRQINLENFTIEANGVVAILLEKGL HCCCEEEEEEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA