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The map label for this gene is yloC [H]

Identifier: 167040400

GI number: 167040400

Start: 1766506

End: 1767378

Strand: Reverse

Name: yloC [H]

Synonym: Teth514_1763

Alternate gene names: 167040400

Gene position: 1767378-1766506 (Counterclockwise)

Preceding gene: 167040401

Following gene: 167040399

Centisome position: 71.92

GC content: 29.67

Gene sequence:

>873_bases
ATGATAAAAAGCATGACCGGTTATGGAAGAGGTGAGATTAAGGAAAAAGGCTATTATATAACTGTGGAAATTAAATCTTT
AAACCACAGATTTTTAGACATAAATTGCAGGATGAATAAACTTTTAAGTGGACTTGAAGAAAAAGTGAGAGAATTTGTTT
CAAAGCAGATTGCGAGAGGGAGAATAGAATTAAATATTGGTTTTGAAGTGTATGAAAGAAGTATTAATGTTATAGAAATT
GATGAGAATCTTTTGTCAGAATATCTTAGAGTTTTTACTGATGTAAAGTCTAAATTTGAATTAGAAGGATTTATAAAGGT
AAGTGATTTAGTGTATCTGCCGGAAGTTATCAGGGTAAAGAATGAGGATTTGGATTTAGAAGAAATATGGGAGTTATTAA
AACTGCCATTGGGAGAAGCTATTAATAACCTCATTGACATGAGAAACAAAGAAGGTATAAAATTATACGATGATATAGTT
AATAGAATGGGCAAAATTTCAGATATAGTAAAAGAGATTGAAGATTTGAGTTTTGTAATGGTAGAAGATTATAGAAAAAG
ATTGGAACAGCGTATAAAAGAATTGGGGGTAGATATAGATCCTAATAGGATGGCAATGGAAATAGCAATTATTGCTGACA
AGTCATGTATTGCTGAAGAAATAACAAGGCTTAAAAGCCACATTGTTCAATTTAAAGATTCTTTAAAAGAAGAAGGTTCT
ATAGGTAAAAAATTAGATTTTATAGTTCAGGAGATGAATCGTGAAGCTAATACGATTGCTTCAAAGTCAATAGACTATAG
AATTTCTAATAAAGTCATTGACTTGAAAAATGAGATTGAAAAAATTAGAGAACAAGTTCAAAATATTGAGTAG

Upstream 100 bases:

>100_bases
TATTTATTTATCTGGAAGTGTGGAAGAAGTCTTCAGGGGCGAAATAGAGCTTTAGTTTAATACAGTGAGAATTTGACTAT
AATAAGAAAAAGGTGATATG

Downstream 100 bases:

>100_bases
GGAGGAAAAAGTATGTCGATTAAATTAATAAATATTGGTTTTGGCAATATAATTTCGGCTAATAGATTGGTGGCAATAGT
TAGTCCAGAATCTGCACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIKSMTGYGRGEIKEKGYYITVEIKSLNHRFLDINCRMNKLLSGLEEKVREFVSKQIARGRIELNIGFEVYERSINVIEI
DENLLSEYLRVFTDVKSKFELEGFIKVSDLVYLPEVIRVKNEDLDLEEIWELLKLPLGEAINNLIDMRNKEGIKLYDDIV
NRMGKISDIVKEIEDLSFVMVEDYRKRLEQRIKELGVDIDPNRMAMEIAIIADKSCIAEEITRLKSHIVQFKDSLKEEGS
IGKKLDFIVQEMNREANTIASKSIDYRISNKVIDLKNEIEKIREQVQNIE

Sequences:

>Translated_290_residues
MIKSMTGYGRGEIKEKGYYITVEIKSLNHRFLDINCRMNKLLSGLEEKVREFVSKQIARGRIELNIGFEVYERSINVIEI
DENLLSEYLRVFTDVKSKFELEGFIKVSDLVYLPEVIRVKNEDLDLEEIWELLKLPLGEAINNLIDMRNKEGIKLYDDIV
NRMGKISDIVKEIEDLSFVMVEDYRKRLEQRIKELGVDIDPNRMAMEIAIIADKSCIAEEITRLKSHIVQFKDSLKEEGS
IGKKLDFIVQEMNREANTIASKSIDYRISNKVIDLKNEIEKIREQVQNIE
>Mature_290_residues
MIKSMTGYGRGEIKEKGYYITVEIKSLNHRFLDINCRMNKLLSGLEEKVREFVSKQIARGRIELNIGFEVYERSINVIEI
DENLLSEYLRVFTDVKSKFELEGFIKVSDLVYLPEVIRVKNEDLDLEEIWELLKLPLGEAINNLIDMRNKEGIKLYDDIV
NRMGKISDIVKEIEDLSFVMVEDYRKRLEQRIKELGVDIDPNRMAMEIAIIADKSCIAEEITRLKSHIVQFKDSLKEEGS
IGKKLDFIVQEMNREANTIASKSIDYRISNKVIDLKNEIEKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=290, Percent_Identity=32.0689655172414, Blast_Score=147, Evalue=9e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33871; Mature: 33871

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSMTGYGRGEIKEKGYYITVEIKSLNHRFLDINCRMNKLLSGLEEKVREFVSKQIARG
CCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
RIELNIGFEVYERSINVIEIDENLLSEYLRVFTDVKSKFELEGFIKVSDLVYLPEVIRVK
EEEEEECHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHC
NEDLDLEEIWELLKLPLGEAINNLIDMRNKEGIKLYDDIVNRMGKISDIVKEIEDLSFVM
CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VEDYRKRLEQRIKELGVDIDPNRMAMEIAIIADKSCIAEEITRLKSHIVQFKDSLKEEGS
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
IGKKLDFIVQEMNREANTIASKSIDYRISNKVIDLKNEIEKIREQVQNIE
CCHHHHHHHHHHCCHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKSMTGYGRGEIKEKGYYITVEIKSLNHRFLDINCRMNKLLSGLEEKVREFVSKQIARG
CCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
RIELNIGFEVYERSINVIEIDENLLSEYLRVFTDVKSKFELEGFIKVSDLVYLPEVIRVK
EEEEEECHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHC
NEDLDLEEIWELLKLPLGEAINNLIDMRNKEGIKLYDDIVNRMGKISDIVKEIEDLSFVM
CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VEDYRKRLEQRIKELGVDIDPNRMAMEIAIIADKSCIAEEITRLKSHIVQFKDSLKEEGS
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
IGKKLDFIVQEMNREANTIASKSIDYRISNKVIDLKNEIEKIREQVQNIE
CCHHHHHHHHHHCCHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]