Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is yloU [H]

Identifier: 167040380

GI number: 167040380

Start: 1748813

End: 1749163

Strand: Reverse

Name: yloU [H]

Synonym: Teth514_1743

Alternate gene names: 167040380

Gene position: 1749163-1748813 (Counterclockwise)

Preceding gene: 167040382

Following gene: 167040379

Centisome position: 71.18

GC content: 33.33

Gene sequence:

>351_bases
ATGATTCAAATAAAAAACAAATATGGAGTAATAAATATCTCAAATGATGCAATTGCTGCTATAACCAGTAGAGCAGTAGC
GGAGTGTTATGGGATAGTAGGCTTGGGGAGGAGAGGAGCAAATGGATTAATAGAAATATTTAAAACAGAGAATTCTGGCA
GAGGAGTCAAAGTTTTAGCCACAGAAGATGGTGTAACACTGGAAGTTTATATAGTTGTCCTATACGGTGTAAATATAAAA
ACTGTTTCAGCGAATGCTATTGAAAAAGTGAAATACGCTGTCGAGAAATTTGTAGGAGTAAAAGTAGAAAATGTAATAAT
AAATGTTCAGGGAATTAAAGTTGATAATTGA

Upstream 100 bases:

>100_bases
GTAAAATTTTAATAGGTGAGTAATATAGCATCGCAGGCTAGTTGATGTTATTTAAATATTCAGGTAAAATATAAATTAAG
ATTGATTTGGAGGGATATTA

Downstream 100 bases:

>100_bases
GGAGGAAGTTGTGTTGAAGTACTTAGATGGAAAAACTTTAAAGAACATGATGATAGCAAGCTCTAATTATCTTTTTAACA
ATAAAGTAGAAGTTGATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MIQIKNKYGVINISNDAIAAITSRAVAECYGIVGLGRRGANGLIEIFKTENSGRGVKVLATEDGVTLEVYIVVLYGVNIK
TVSANAIEKVKYAVEKFVGVKVENVIINVQGIKVDN

Sequences:

>Translated_116_residues
MIQIKNKYGVINISNDAIAAITSRAVAECYGIVGLGRRGANGLIEIFKTENSGRGVKVLATEDGVTLEVYIVVLYGVNIK
TVSANAIEKVKYAVEKFVGVKVENVIINVQGIKVDN
>Mature_116_residues
MIQIKNKYGVINISNDAIAAITSRAVAECYGIVGLGRRGANGLIEIFKTENSGRGVKVLATEDGVTLEVYIVVLYGVNIK
TVSANAIEKVKYAVEKFVGVKVENVIINVQGIKVDN

Specific function: Unknown

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asp23 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005531 [H]

Pfam domain/function: PF03780 DUF322 [H]

EC number: NA

Molecular weight: Translated: 12441; Mature: 12441

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIKNKYGVINISNDAIAAITSRAVAECYGIVGLGRRGANGLIEIFKTENSGRGVKVLA
CEEECCCEEEEEECCCCEEHHHHHHHHHHHCEEECCCCCCCCEEEEEEECCCCCCEEEEE
TEDGVTLEVYIVVLYGVNIKTVSANAIEKVKYAVEKFVGVKVENVIINVQGIKVDN
ECCCCEEEEEEEEEECCEEEEECHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MIQIKNKYGVINISNDAIAAITSRAVAECYGIVGLGRRGANGLIEIFKTENSGRGVKVLA
CEEECCCEEEEEECCCCEEHHHHHHHHHHHCEEECCCCCCCCEEEEEEECCCCCCEEEEE
TEDGVTLEVYIVVLYGVNIKTVSANAIEKVKYAVEKFVGVKVENVIINVQGIKVDN
ECCCCEEEEEEEEEECCEEEEECHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]