| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is recG [H]
Identifier: 167040378
GI number: 167040378
Start: 1745164
End: 1747209
Strand: Reverse
Name: recG [H]
Synonym: Teth514_1741
Alternate gene names: 167040378
Gene position: 1747209-1745164 (Counterclockwise)
Preceding gene: 167040379
Following gene: 167040377
Centisome position: 71.1
GC content: 32.75
Gene sequence:
>2046_bases ATGCCTTTGAATCTGGATATTCAGTACGTAAAAGGAGTTGGACCTAAAAGGGCAAAACTTCTTAAAAAATTGGGAATAAA CACAGTAGAGGACTTATTATTCTATTTTCCCAAAGATTATGAGAATAGAAGCGATATTTTAAAGATTGAGGACCTAAAAG TTGGGGAAAAACAAACTTTTAGAGGTTACATCGCAGGTAGCCCGAGAGAAATAAAGACTTCAAAAGTCATCATAACTAAA GTGCCTGTAAAAGATGGGACAGGTGTAGTAGAATTAGTCTGGTATAATCAGCCTTATATAAAGAATAATTTTAAAATTGG TGAAGAATATATAATAAACGGCAAATTGCAATTTAAATATGGGCAGTTAATAGTAGAAAATCCTGTTTTAGAAAAAAGTG AAGATTTTAAATTAAACACTGGAAGGATAGTTCCTATTTATGGGCTTACAGAAGGGTTGACGCAAAATGCTATCAGGAAG ATAATGTTTAATGCGCTTCATGATTATGTACAGGAAGTGGAAGAGTTTTTTGATGAAGAATTTTTATCTGAAAAAGGATT AATGGATATAAAGAACGCACTAATTAATATAAATTTCCCCCAAAATGAGGCATATTTAGAACAAGCAAAATACAGATTTA AATATCAAGAACTTTTTTTGCTGCAAATGGCCTTATTTTTAATGAAAAGGTCTGTCAAAGAAAAAAAAGGAATAAAATTT GAACAGGCAGATTTAAAGCCTTTTCTTATGGGATTGCCTTTTAAATTGACTTTGGCACAGATAAAAGTTTTAAAAGAAAT AATTGCAGATATGAATTCTCACAAAGTGATGAATCGCTTAGTGCAGGGAGATGTGGGCTCTGGTAAAACAGTTGTTGCAG CTTGCAGCATGTACATTGCTGTCAAGAATGGCTATCAAGTGGCAATGATGGCTCCAACGGAGATATTGGCAAAACAGCAT TATTATACGTTAAAAGAGCTTTTTAGAAATACTGATATAAAAATTGGGCTTTTGTCTGGTAGCATTTCACCTTCTAATAA AAAAGAAGTATTAGAAAAAATCAAAAATGGAGATTATGATATTGTAGTAGGGACCCATGCACTAATAGAGGATAATGTTA TTTTTAACAATTTAGGACTTTGTATAACTGATGAGCAACACCGATTTGGTGTGAGACAAAGGGCGCTTTTGACACAAAAA GGTGAAAATCCCGATGTTTTGGTTATGACAGCTACACCAATTCCTCGGACATTTGCTCTCATTCTTTATGGAGATTTAGA TATATCAATAATTGACCAATTACCTCCTGGAAGAAAAAAAGTTAAAACATACGTTATTTCTTCTTCTGTGAGAGAAAAAG CCTACGAGTTTGCAATGAAGGAAGTAAAAAAAGGAAGGCAAGTTTATGTAGTTTGTCCACTAATTGAAGAATCGGATAAA ATAAATGCGATGTCTGCCGAAATAGTATATAGAGAAATTTATAAAGATGCTTTTAAGGAAGCTAAAGTAGGACTTTTACA CGGTAAAATGGCGGACAGCGATAAAGAGAAGGTTATGGAAGAGTTTGTAAATGGAAAAATTGATATTTTAGTTTCGACTA CAGTAATAGAGGTGGGAGTAAATGTACCTAATGCAACAGTGATGATTGTAGAAAATGCAGAAAGATTTGGACTTGCACAG CTTCACCAATTGAGAGGTAGAGTTGGCAGGTCAGAATTTCAGTCTTACTGTATTTTGATTAGTTATTCTAATTCTGACAT AGCTAAAAAAAGACTGGGAGTTTTAGCTCAAACTTCTGATGGATTTAAAATTGCAGAAAAAGATTTAGAAATAAGAGGGC CAGGTGAATTTCTAGGATTAAGACAGCATGGACTTCCTGAATTTAAAATTGCTAACATTTTTGAAGACATAGATGTTTTA GAGAGAGTGCAAAAAGATGTAGAAGAGTTACTGGAAAAAGACCCTAAACTTGAAAACTATCCAAAGCTAAGAAGTATTTT ACTTAATCAATTTTATCAAAAATTAGAAGGAATAATATTAAATTAG
Upstream 100 bases:
>100_bases ATTGAAAAATTCTCTTTCCGTAGATGCAGATGTGGAAATTTATTTTGGAGGTCAGCCGCTTTACTATTATGTTATATCAA TAGAGTAAAGGTGAAACGAA
Downstream 100 bases:
>100_bases AGAAGGAGAATAGTAGTATGGAAAAGATAGCAATTGTTACAGATAGCTTGTCTGACATACCTGAGGATTTAGTGAAAACT TATAGGATATTTATAGTTCC
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MPLNLDIQYVKGVGPKRAKLLKKLGINTVEDLLFYFPKDYENRSDILKIEDLKVGEKQTFRGYIAGSPREIKTSKVIITK VPVKDGTGVVELVWYNQPYIKNNFKIGEEYIINGKLQFKYGQLIVENPVLEKSEDFKLNTGRIVPIYGLTEGLTQNAIRK IMFNALHDYVQEVEEFFDEEFLSEKGLMDIKNALININFPQNEAYLEQAKYRFKYQELFLLQMALFLMKRSVKEKKGIKF EQADLKPFLMGLPFKLTLAQIKVLKEIIADMNSHKVMNRLVQGDVGSGKTVVAACSMYIAVKNGYQVAMMAPTEILAKQH YYTLKELFRNTDIKIGLLSGSISPSNKKEVLEKIKNGDYDIVVGTHALIEDNVIFNNLGLCITDEQHRFGVRQRALLTQK GENPDVLVMTATPIPRTFALILYGDLDISIIDQLPPGRKKVKTYVISSSVREKAYEFAMKEVKKGRQVYVVCPLIEESDK INAMSAEIVYREIYKDAFKEAKVGLLHGKMADSDKEKVMEEFVNGKIDILVSTTVIEVGVNVPNATVMIVENAERFGLAQ LHQLRGRVGRSEFQSYCILISYSNSDIAKKRLGVLAQTSDGFKIAEKDLEIRGPGEFLGLRQHGLPEFKIANIFEDIDVL ERVQKDVEELLEKDPKLENYPKLRSILLNQFYQKLEGIILN
Sequences:
>Translated_681_residues MPLNLDIQYVKGVGPKRAKLLKKLGINTVEDLLFYFPKDYENRSDILKIEDLKVGEKQTFRGYIAGSPREIKTSKVIITK VPVKDGTGVVELVWYNQPYIKNNFKIGEEYIINGKLQFKYGQLIVENPVLEKSEDFKLNTGRIVPIYGLTEGLTQNAIRK IMFNALHDYVQEVEEFFDEEFLSEKGLMDIKNALININFPQNEAYLEQAKYRFKYQELFLLQMALFLMKRSVKEKKGIKF EQADLKPFLMGLPFKLTLAQIKVLKEIIADMNSHKVMNRLVQGDVGSGKTVVAACSMYIAVKNGYQVAMMAPTEILAKQH YYTLKELFRNTDIKIGLLSGSISPSNKKEVLEKIKNGDYDIVVGTHALIEDNVIFNNLGLCITDEQHRFGVRQRALLTQK GENPDVLVMTATPIPRTFALILYGDLDISIIDQLPPGRKKVKTYVISSSVREKAYEFAMKEVKKGRQVYVVCPLIEESDK INAMSAEIVYREIYKDAFKEAKVGLLHGKMADSDKEKVMEEFVNGKIDILVSTTVIEVGVNVPNATVMIVENAERFGLAQ LHQLRGRVGRSEFQSYCILISYSNSDIAKKRLGVLAQTSDGFKIAEKDLEIRGPGEFLGLRQHGLPEFKIANIFEDIDVL ERVQKDVEELLEKDPKLENYPKLRSILLNQFYQKLEGIILN >Mature_680_residues PLNLDIQYVKGVGPKRAKLLKKLGINTVEDLLFYFPKDYENRSDILKIEDLKVGEKQTFRGYIAGSPREIKTSKVIITKV PVKDGTGVVELVWYNQPYIKNNFKIGEEYIINGKLQFKYGQLIVENPVLEKSEDFKLNTGRIVPIYGLTEGLTQNAIRKI MFNALHDYVQEVEEFFDEEFLSEKGLMDIKNALININFPQNEAYLEQAKYRFKYQELFLLQMALFLMKRSVKEKKGIKFE QADLKPFLMGLPFKLTLAQIKVLKEIIADMNSHKVMNRLVQGDVGSGKTVVAACSMYIAVKNGYQVAMMAPTEILAKQHY YTLKELFRNTDIKIGLLSGSISPSNKKEVLEKIKNGDYDIVVGTHALIEDNVIFNNLGLCITDEQHRFGVRQRALLTQKG ENPDVLVMTATPIPRTFALILYGDLDISIIDQLPPGRKKVKTYVISSSVREKAYEFAMKEVKKGRQVYVVCPLIEESDKI NAMSAEIVYREIYKDAFKEAKVGLLHGKMADSDKEKVMEEFVNGKIDILVSTTVIEVGVNVPNATVMIVENAERFGLAQL HQLRGRVGRSEFQSYCILISYSNSDIAKKRLGVLAQTSDGFKIAEKDLEIRGPGEFLGLRQHGLPEFKIANIFEDIDVLE RVQKDVEELLEKDPKLENYPKLRSILLNQFYQKLEGIILN
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=674, Percent_Identity=38.8724035608309, Blast_Score=433, Evalue=1e-122, Organism=Escherichia coli, GI1787357, Length=405, Percent_Identity=39.7530864197531, Blast_Score=290, Evalue=1e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 77547; Mature: 77416
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNLDIQYVKGVGPKRAKLLKKLGINTVEDLLFYFPKDYENRSDILKIEDLKVGEKQTF CCCCCEEHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHC RGYIAGSPREIKTSKVIITKVPVKDGTGVVELVWYNQPYIKNNFKIGEEYIINGKLQFKY CEEECCCCCEEECCEEEEEEECCCCCCCEEEEEEECCCEECCCCEECCEEEECCEEEEEE GQLIVENPVLEKSEDFKLNTGRIVPIYGLTEGLTQNAIRKIMFNALHDYVQEVEEFFDEE CCEEEECCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSEKGLMDIKNALININFPQNEAYLEQAKYRFKYQELFLLQMALFLMKRSVKEKKGIKF HHHCCCHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE EQADLKPFLMGLPFKLTLAQIKVLKEIIADMNSHKVMNRLVQGDVGSGKTVVAACSMYIA ECCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHEEEEE VKNGYQVAMMAPTEILAKQHYYTLKELFRNTDIKIGLLSGSISPSNKKEVLEKIKNGDYD EECCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEE IVVGTHALIEDNVIFNNLGLCITDEQHRFGVRQRALLTQKGENPDVLVMTATPIPRTFAL EEEECHHHEECCEEEECCCEEEECCHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCEEEE ILYGDLDISIIDQLPPGRKKVKTYVISSSVREKAYEFAMKEVKKGRQVYVVCPLIEESDK EEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC INAMSAEIVYREIYKDAFKEAKVGLLHGKMADSDKEKVMEEFVNGKIDILVSTTVIEVGV CCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEEEEEEEEC NVPNATVMIVENAERFGLAQLHQLRGRVGRSEFQSYCILISYSNSDIAKKRLGVLAQTSD CCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHCEEEECCC GFKIAEKDLEIRGPGEFLGLRQHGLPEFKIANIFEDIDVLERVQKDVEELLEKDPKLENY CCEEECCCCEECCCHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PKLRSILLNQFYQKLEGIILN HHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure PLNLDIQYVKGVGPKRAKLLKKLGINTVEDLLFYFPKDYENRSDILKIEDLKVGEKQTF CCCCEEHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHC RGYIAGSPREIKTSKVIITKVPVKDGTGVVELVWYNQPYIKNNFKIGEEYIINGKLQFKY CEEECCCCCEEECCEEEEEEECCCCCCCEEEEEEECCCEECCCCEECCEEEECCEEEEEE GQLIVENPVLEKSEDFKLNTGRIVPIYGLTEGLTQNAIRKIMFNALHDYVQEVEEFFDEE CCEEEECCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSEKGLMDIKNALININFPQNEAYLEQAKYRFKYQELFLLQMALFLMKRSVKEKKGIKF HHHCCCHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE EQADLKPFLMGLPFKLTLAQIKVLKEIIADMNSHKVMNRLVQGDVGSGKTVVAACSMYIA ECCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHEEEEE VKNGYQVAMMAPTEILAKQHYYTLKELFRNTDIKIGLLSGSISPSNKKEVLEKIKNGDYD EECCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEE IVVGTHALIEDNVIFNNLGLCITDEQHRFGVRQRALLTQKGENPDVLVMTATPIPRTFAL EEEECHHHEECCEEEECCCEEEECCHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCEEEE ILYGDLDISIIDQLPPGRKKVKTYVISSSVREKAYEFAMKEVKKGRQVYVVCPLIEESDK EEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC INAMSAEIVYREIYKDAFKEAKVGLLHGKMADSDKEKVMEEFVNGKIDILVSTTVIEVGV CCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEEEEEEEEC NVPNATVMIVENAERFGLAQLHQLRGRVGRSEFQSYCILISYSNSDIAKKRLGVLAQTSD CCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHCEEEECCC GFKIAEKDLEIRGPGEFLGLRQHGLPEFKIANIFEDIDVLERVQKDVEELLEKDPKLENY CCEEECCCCEECCCHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PKLRSILLNQFYQKLEGIILN HHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]