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The map label for this gene is tsf

Identifier: 167040297

GI number: 167040297

Start: 1677163

End: 1677777

Strand: Reverse

Name: tsf

Synonym: Teth514_1660

Alternate gene names: 167040297

Gene position: 1677777-1677163 (Counterclockwise)

Preceding gene: 167040298

Following gene: 167040296

Centisome position: 68.28

GC content: 33.98

Gene sequence:

>615_bases
ATGATATCAGCACAAGCTGTTAAAGAATTAAGAGAACGAACTGGCGCTGGAATGATGGATTGTAAAAAAGCTTTAATGGA
AGCAAATGGAGATATGGAAAAGGCCATAGATATTTTAAGAGAGAAAGGATTGGCTGCTGCTGCTAAAAAAGCAGGTAGAG
TTGCTAATGAAGGCTTAGTTGATGCCTACATACACAGTGGTGGAAGAATAGGGGTTTTAGTAGAAGTAAATTGTGAGACA
GATTTTGTTGCAAATACTGATGAATTTAAAAATTTTGTTAAAGAAATATGCATGCAAATTGCTGCCGCAAATCCAAAATA
TATTTCTCGTGAAGATGTGCCACAAGCTGTTTTGGAAAAAGAAAGAGAAATTTTAAAAGCACAGGCGTTAAATGAAGGGA
AACCCCAAAATGTCGTAGATAGAATAGTTGAAGGACGTATTGAAAAATTTTACAAAGAGAATTGCTTGTTAGAACAAGAA
TACATTAGAGACCCAGAAAAAACAGTGAAAGATTTGCTAAATGAGACGATTGCAAAATTAGGAGAAAATATTGTAATAAG
AAGATTTGTTAGATTTGAAAGAGGAGAAGGTATTGAAACTTCCTCAAATGAGTAA

Upstream 100 bases:

>100_bases
GCTTCAGAAGAGTGAAAATTTTTGTCTAGTGGTAAGGAAAAAGGCAAAGCTCCTTACCACTATTGTATATCATTTATCAT
TATCTAAGGAGGTTTTTCTA

Downstream 100 bases:

>100_bases
TAAAATTAAATAGGCAACCACATAGGGACACGGTTGTGTCCCATTTTTATAAATTACTTAAAAGATTAAGAAGGATTTTC
AAAATTTTTATAGAACTTAT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MISAQAVKELRERTGAGMMDCKKALMEANGDMEKAIDILREKGLAAAAKKAGRVANEGLVDAYIHSGGRIGVLVEVNCET
DFVANTDEFKNFVKEICMQIAAANPKYISREDVPQAVLEKEREILKAQALNEGKPQNVVDRIVEGRIEKFYKENCLLEQE
YIRDPEKTVKDLLNETIAKLGENIVIRRFVRFERGEGIETSSNE

Sequences:

>Translated_204_residues
MISAQAVKELRERTGAGMMDCKKALMEANGDMEKAIDILREKGLAAAAKKAGRVANEGLVDAYIHSGGRIGVLVEVNCET
DFVANTDEFKNFVKEICMQIAAANPKYISREDVPQAVLEKEREILKAQALNEGKPQNVVDRIVEGRIEKFYKENCLLEQE
YIRDPEKTVKDLLNETIAKLGENIVIRRFVRFERGEGIETSSNE
>Mature_204_residues
MISAQAVKELRERTGAGMMDCKKALMEANGDMEKAIDILREKGLAAAAKKAGRVANEGLVDAYIHSGGRIGVLVEVNCET
DFVANTDEFKNFVKEICMQIAAANPKYISREDVPQAVLEKEREILKAQALNEGKPQNVVDRIVEGRIEKFYKENCLLEQE
YIRDPEKTVKDLLNETIAKLGENIVIRRFVRFERGEGIETSSNE

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI291084500, Length=201, Percent_Identity=31.8407960199005, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI171846268, Length=199, Percent_Identity=30.1507537688442, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI291084498, Length=120, Percent_Identity=35.8333333333333, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI291084502, Length=100, Percent_Identity=38, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1786366, Length=127, Percent_Identity=50.3937007874016, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17561440, Length=202, Percent_Identity=28.2178217821782, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19921466, Length=99, Percent_Identity=42.4242424242424, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_THEP3 (B0K9R5)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001665214.1
- ProteinModelPortal:   B0K9R5
- SMR:   B0K9R5
- GeneID:   5875196
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_1224
- HOGENOM:   HBG713289
- OMA:   NVEYVSI
- ProtClustDB:   PRK12332
- BioCyc:   TPSE340099:TETH39_1224-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 22863; Mature: 22863

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAQAVKELRERTGAGMMDCKKALMEANGDMEKAIDILREKGLAAAAKKAGRVANEGLV
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
DAYIHSGGRIGVLVEVNCETDFVANTDEFKNFVKEICMQIAAANPKYISREDVPQAVLEK
HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
EREILKAQALNEGKPQNVVDRIVEGRIEKFYKENCLLEQEYIRDPEKTVKDLLNETIAKL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH
GENIVIRRFVRFERGEGIETSSNE
HHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MISAQAVKELRERTGAGMMDCKKALMEANGDMEKAIDILREKGLAAAAKKAGRVANEGLV
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
DAYIHSGGRIGVLVEVNCETDFVANTDEFKNFVKEICMQIAAANPKYISREDVPQAVLEK
HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
EREILKAQALNEGKPQNVVDRIVEGRIEKFYKENCLLEQEYIRDPEKTVKDLLNETIAKL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH
GENIVIRRFVRFERGEGIETSSNE
HHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA