| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is tepA [H]
Identifier: 167040270
GI number: 167040270
Start: 1651051
End: 1651767
Strand: Reverse
Name: tepA [H]
Synonym: Teth514_1633
Alternate gene names: 167040270
Gene position: 1651767-1651051 (Counterclockwise)
Preceding gene: 167040271
Following gene: 167040269
Centisome position: 67.22
GC content: 33.75
Gene sequence:
>717_bases ATGAGCAATTTTTTAAAAAATGAAGAAACAGAACAACCTCAGACTTTACCACCTGTTCAAGAAAATTTAAAAAATTTAGG CCAGACAAACGTACCTAATTTTGAAAGCAATATTCATTGTCTTACTATAATAGGACAAATTGAAGGCCACATGATTCTGC CTCCACAAAACAAAACCACAAAGTATGAACACATAATACCACAATTGGTAGCAATAGAAGAAAACCCTAATATAAAAGGA GTTTTAATTTTATTAAATACTGTAGGAGGAGATGTGGAAGCAGGTCTTGCTATCGCGGAAATGATAGCAAGCCTTTCTAA GCCTACTGTATCTATAGTATTAGGTGGAGGTCACAGTATCGGGGTGCCTTTAGCAGTTTCAGCAAATTATTCTTACATAG TGCCAAGTGCTACCATGACAATACATCCTATCAGAATGACAGGATTAATAGTAGGAGTTCCCCAAACTTTTGATTATTTC AACAAAATGCAAGATAGAATAGTAGAGTTTATTGTGCGAAATTCAAAAATAAAAAGAGATACTTTTATGAAACTTATGCT TAAAACTGGAGAATTAGCCAACGACATAGGAACAATCTTAGTTGGAAAAGAAGCAGTAGATTACGGTTTGATTGACGAAA TAGGGGGTATCAAAGAAGCTTTAAAGAGGTTACACAATATGATAGAAGAAAGAGAAAAAAAGAAAGGTGAAGAATAA
Upstream 100 bases:
>100_bases GAAGCAGTTAGAGTTCTACATGAGGAATTTAATCTTTAAAACTTAGAAGCGCATACTATTGCGCTTTTTTCTTATACTAA TTATTAGGAGTGTGATAAAG
Downstream 100 bases:
>100_bases TGTTATATACAATAATTCCCTATGAATTAATTTTTGAAAAAAGAGAAGATATACCCACCAATTACATAGAACTAAAGATG GGGAATAAACAGTTAGTAGT
Product: peptidase S14, ClpP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSNFLKNEETEQPQTLPPVQENLKNLGQTNVPNFESNIHCLTIIGQIEGHMILPPQNKTTKYEHIIPQLVAIEENPNIKG VLILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGVPLAVSANYSYIVPSATMTIHPIRMTGLIVGVPQTFDYF NKMQDRIVEFIVRNSKIKRDTFMKLMLKTGELANDIGTILVGKEAVDYGLIDEIGGIKEALKRLHNMIEEREKKKGEE
Sequences:
>Translated_238_residues MSNFLKNEETEQPQTLPPVQENLKNLGQTNVPNFESNIHCLTIIGQIEGHMILPPQNKTTKYEHIIPQLVAIEENPNIKG VLILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGVPLAVSANYSYIVPSATMTIHPIRMTGLIVGVPQTFDYF NKMQDRIVEFIVRNSKIKRDTFMKLMLKTGELANDIGTILVGKEAVDYGLIDEIGGIKEALKRLHNMIEEREKKKGEE >Mature_237_residues SNFLKNEETEQPQTLPPVQENLKNLGQTNVPNFESNIHCLTIIGQIEGHMILPPQNKTTKYEHIIPQLVAIEENPNIKGV LILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGVPLAVSANYSYIVPSATMTIHPIRMTGLIVGVPQTFDYFN KMQDRIVEFIVRNSKIKRDTFMKLMLKTGELANDIGTILVGKEAVDYGLIDEIGGIKEALKRLHNMIEEREKKKGEE
Specific function: Required for efficient translocation of pre-proteins across the membrane [H]
COG id: COG0740
COG function: function code OU; Protease subunit of ATP-dependent Clp proteases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S14 family. TepA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001907 [H]
Pfam domain/function: PF00574 CLP_protease [H]
EC number: NA
Molecular weight: Translated: 26239; Mature: 26108
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFLKNEETEQPQTLPPVQENLKNLGQTNVPNFESNIHCLTIIGQIEGHMILPPQNKTT CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCC KYEHIIPQLVAIEENPNIKGVLILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSI HHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC GVPLAVSANYSYIVPSATMTIHPIRMTGLIVGVPQTFDYFNKMQDRIVEFIVRNSKIKRD CCEEEEECCCEEEECCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHH TFMKLMLKTGELANDIGTILVGKEAVDYGLIDEIGGIKEALKRLHNMIEEREKKKGEE HHHHHHHHHCHHHHHHHHEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNFLKNEETEQPQTLPPVQENLKNLGQTNVPNFESNIHCLTIIGQIEGHMILPPQNKTT CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCC KYEHIIPQLVAIEENPNIKGVLILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSI HHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC GVPLAVSANYSYIVPSATMTIHPIRMTGLIVGVPQTFDYFNKMQDRIVEFIVRNSKIKRD CCEEEEECCCEEEECCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHH TFMKLMLKTGELANDIGTILVGKEAVDYGLIDEIGGIKEALKRLHNMIEEREKKKGEE HHHHHHHHHCHHHHHHHHEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3129532; 10455123 [H]