| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is mutL [H]
Identifier: 167040249
GI number: 167040249
Start: 1629397
End: 1631241
Strand: Direct
Name: mutL [H]
Synonym: Teth514_1612
Alternate gene names: 167040249
Gene position: 1629397-1631241 (Clockwise)
Preceding gene: 167040248
Following gene: 167040250
Centisome position: 66.31
GC content: 30.24
Gene sequence:
>1845_bases ATGAATAAAATTCATCTTTTAGATGAAAAGACAATAAATAAAATTTCTGCAGGAGAAGTTGTTGAAAGACCTGCCTCTAT AGTGAAAGAATTAATTGAAAATTCTATTGACGCTGGAAGCAAAAATATTACAGTGGAAATTTTAGAAGGTGGCATTCCTT ATATAAAGGTATCTGACGACGGTTGTGGAATGAATGAAATAGACGCCATTTTAGCTTTTGAAAGGCACGCCACCAGCAAG ATAAAATCTGACAATGACCTTTATAGTATAGGGACATTAGGTTTTAGAGGAGAGGCCTTAGCTAGTATTGCGGCAGTTTC CCATGTAACTTTACAGACTAAAGAAGAAGGAGCTTTATTTGGTACTAAAGTTGTTGTGGAAGGTGGGAAGGTAGTAGAAA AAACTACTTGTGGTTGTGCAAAAGGATGTAGTATTGAAGTAAGAGATGTGTTTTTTAATACGCCGGCACGAAGGAAGTTT TTGAAACGTCCTTCAACAGAGAGTATGTATATAATTGATGTTGTAACTAAATTGTGCCTTTCCCATCCTGAAGTTTCTTT TAAATATGTAAAAGACAGGAAACTACAGTTTATAACATCAGGTAATGGAAATATAGAAGATGTAATTTTGAGGCTTTTTG GAAATGAAGTCTACTCTTCTCTTATGTCAGCTTCTTTTGAAAGTGAAGATTTGAAATTAAAGATTTTAGCAGGTAAAAAT TCTTTAAATTATTCAAATAGGAATATGCAATTTTTCTATGTAAATGGAAGATACGTAAAAAATAAAACCCTCTCGGCCGC TGTAGATGAAGCTTTTAAGACTTATATACCTGTGAACCGATATCCTGCTGTTTTTTTGTACATGGAAATAGACCCAAGGC AGATTGATGTGAATATACATCCTTCAAAATTAGAGATAAAATTTTCAGATGAAAGAAGAATTTTTGAAGCTGTTTATAAA ACTATAAAGGATAGCCTTCATAAATACAACTTGATACCAGAAGTAAAAATTGAAGAAAAGAAAAATATCTTTGAAATTGA AACTCCAACTATTTCAGCTGAGCAGACGAAATTATACTTGACTTCTTCTGATAAAGAATTAGAAGAGGAAAAAAAGAAAT TTGACAATGAATTTAAAGGTAAGAATGTTTTTTTAAAAGATAATGTATTAAAAGAAAATAGTAAAAATAGTAGTTTAGAT AACCATTTGGCTGTTTATGAGGAATATGAACATGAAAAAGAAGAAATAAATAAAAATGACCTTGCTAAAAAAATAAGTGA TATAAGAATAGTGGGCACATTATTTTCTACTTATATAATCGTAGAAAAGGAAGATGTATTCTATATAATTGACCAACATG CTGCCCACGAAAGGATTTTATATGAAAAATTTACTTCCCAATATGAAAAAATTCAAACAAGGCAGGTAACATTTCCTATT GTAGTAGAATTACAACCAAGAGACTTAGAACTTGTTCATCAAGAAAAAGAGCTTTTAAATAAATTAGGTTATGTATTTGA GGAATTTGGGAACAATTGTATAATATTAAGAGAAGTGCCTGTAATTTTAGGACAGCCAGAAGCAAGGCAGTTATTTATAG ATATAGTGGAAAAACTTAAAGATAAGGAACTTATCAATAAAATATCCTTAAAAGAAGAAAATATTATAATGATGGCTTGT AAAGCTGCAGTAAAAGCTATGGATAATTTATCTGAAAAAGAAATTCATAAACTTTTTGATGACTTAAAAATTACAGAAAA TCCTTATACTTGTCCTCACGGAAGACCTGTTATAATCGCTATAACAAAAACTCAGTTAGAAAAGATGTTTAAAAGAATTA TGTAA
Upstream 100 bases:
>100_bases ATATAGCCAATTGCGATGTGGACAACATGACTCCTATTCAAGCTCTAAATTATTTATATGAATTAAAGGAGAAGGCAATC TCCTTGAGGAGCGGAGTATT
Downstream 100 bases:
>100_bases TATAAGGGTGATGGGATGGCTATACAAATTGTGCTTATTGTTGGGCCCACAGCCTCTGGCAAGTCTAAATTAGCAGTAGA CGTGGCAAAAGAATTTAATG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MNKIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGCGMNEIDAILAFERHATSK IKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGTKVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKF LKRPSTESMYIIDVVTKLCLSHPEVSFKYVKDRKLQFITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGKN SLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNIHPSKLEIKFSDERRIFEAVYK TIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLYLTSSDKELEEEKKKFDNEFKGKNVFLKDNVLKENSKNSSLD NHLAVYEEYEHEKEEINKNDLAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYEKIQTRQVTFPI VVELQPRDLELVHQEKELLNKLGYVFEEFGNNCIILREVPVILGQPEARQLFIDIVEKLKDKELINKISLKEENIIMMAC KAAVKAMDNLSEKEIHKLFDDLKITENPYTCPHGRPVIIAITKTQLEKMFKRIM
Sequences:
>Translated_614_residues MNKIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGCGMNEIDAILAFERHATSK IKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGTKVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKF LKRPSTESMYIIDVVTKLCLSHPEVSFKYVKDRKLQFITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGKN SLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNIHPSKLEIKFSDERRIFEAVYK TIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLYLTSSDKELEEEKKKFDNEFKGKNVFLKDNVLKENSKNSSLD NHLAVYEEYEHEKEEINKNDLAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYEKIQTRQVTFPI VVELQPRDLELVHQEKELLNKLGYVFEEFGNNCIILREVPVILGQPEARQLFIDIVEKLKDKELINKISLKEENIIMMAC KAAVKAMDNLSEKEIHKLFDDLKITENPYTCPHGRPVIIAITKTQLEKMFKRIM >Mature_614_residues MNKIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGCGMNEIDAILAFERHATSK IKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGTKVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKF LKRPSTESMYIIDVVTKLCLSHPEVSFKYVKDRKLQFITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGKN SLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNIHPSKLEIKFSDERRIFEAVYK TIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLYLTSSDKELEEEKKKFDNEFKGKNVFLKDNVLKENSKNSSLD NHLAVYEEYEHEKEEINKNDLAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYEKIQTRQVTFPI VVELQPRDLELVHQEKELLNKLGYVFEEFGNNCIILREVPVILGQPEARQLFIDIVEKLKDKELINKISLKEENIIMMAC KAAVKAMDNLSEKEIHKLFDDLKITENPYTCPHGRPVIIAITKTQLEKMFKRIM
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=331, Percent_Identity=37.7643504531722, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI4505913, Length=347, Percent_Identity=30.2593659942363, Blast_Score=146, Evalue=7e-35, Organism=Homo sapiens, GI310128478, Length=347, Percent_Identity=30.2593659942363, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI4505911, Length=326, Percent_Identity=25.7668711656442, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI189458898, Length=326, Percent_Identity=25.7668711656442, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI263191589, Length=233, Percent_Identity=33.4763948497854, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI189458896, Length=319, Percent_Identity=25.0783699059561, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI310128480, Length=300, Percent_Identity=28.6666666666667, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI91992162, Length=360, Percent_Identity=24.4444444444444, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI91992160, Length=360, Percent_Identity=24.4444444444444, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI263191733, Length=85, Percent_Identity=36.4705882352941, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI263191713, Length=85, Percent_Identity=36.4705882352941, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1790612, Length=331, Percent_Identity=36.5558912386707, Blast_Score=225, Evalue=5e-60, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=34.0625, Blast_Score=182, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17562796, Length=356, Percent_Identity=25, Blast_Score=128, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=323, Percent_Identity=34.6749226006192, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6324247, Length=365, Percent_Identity=28.7671232876712, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=716, Percent_Identity=22.0670391061453, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323063, Length=362, Percent_Identity=25.6906077348066, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI17136968, Length=327, Percent_Identity=33.0275229357798, Blast_Score=202, Evalue=8e-52, Organism=Drosophila melanogaster, GI17136970, Length=357, Percent_Identity=27.4509803921569, Blast_Score=125, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 70311; Mature: 70311
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDD CCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCC GCGMNEIDAILAFERHATSKIKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALF CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCEE GTKVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKFLKRPSTESMYIIDVVTKLCL EEEEEEECCCEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCEEHHHHHHHHHH SHPEVSFKYVKDRKLQFITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGKN CCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC SLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNIH CCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEC PSKLEIKFSDERRIFEAVYKTIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLYL CCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCEEEEE TSSDKELEEEKKKFDNEFKGKNVFLKDNVLKENSKNSSLDNHLAVYEEYEHEKEEINKND ECCCHHHHHHHHHHCHHCCCCEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH LAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYEKIQTRQVTFPI HHHHHHHHHHEEEHHHEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEE VVELQPRDLELVHQEKELLNKLGYVFEEFGNNCIILREVPVILGQPEARQLFIDIVEKLK EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEECCCHHHHHHHHHHHHHH DKELINKISLKEENIIMMACKAAVKAMDNLSEKEIHKLFDDLKITENPYTCPHGRPVIIA HHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCCCCEEEEE ITKTQLEKMFKRIM EEHHHHHHHHHHCC >Mature Secondary Structure MNKIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDD CCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCC GCGMNEIDAILAFERHATSKIKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALF CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCEE GTKVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKFLKRPSTESMYIIDVVTKLCL EEEEEEECCCEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCEEHHHHHHHHHH SHPEVSFKYVKDRKLQFITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGKN CCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC SLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNIH CCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEC PSKLEIKFSDERRIFEAVYKTIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLYL CCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCEEEEE TSSDKELEEEKKKFDNEFKGKNVFLKDNVLKENSKNSSLDNHLAVYEEYEHEKEEINKND ECCCHHHHHHHHHHCHHCCCCEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH LAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYEKIQTRQVTFPI HHHHHHHHHHEEEHHHEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEE VVELQPRDLELVHQEKELLNKLGYVFEEFGNNCIILREVPVILGQPEARQLFIDIVEKLK EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEECCCHHHHHHHHHHHHHH DKELINKISLKEENIIMMACKAAVKAMDNLSEKEIHKLFDDLKITENPYTCPHGRPVIIA HHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCCCCEEEEE ITKTQLEKMFKRIM EEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA