Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is cmk [H]

Identifier: 167040241

GI number: 167040241

Start: 1620755

End: 1621420

Strand: Direct

Name: cmk [H]

Synonym: Teth514_1604

Alternate gene names: 167040241

Gene position: 1620755-1621420 (Clockwise)

Preceding gene: 167040240

Following gene: 167040242

Centisome position: 65.96

GC content: 32.43

Gene sequence:

>666_bases
TTGACTGTAAAAATAGCAATAGATGGGCCGGCGGGGGCTGGCAAGAGCACTGTTGCAAAAAAATTAGCTAAACTTTTAAA
TTATACCTACATTGATACAGGTGCTATGTATAGAGCTATTACATATAAAGCCATACAAGAGAAAGTGAATCTTATAGAAG
AAAACAAAATAGCTGATATTGCGCAAAGTGCTGATATTATCTTAGAAGGAGAAAAAATTTTTTTAGATGGAAAAGACATT
TCTGAAGAAATAAGAAAACCAGGAGTTTCTGAAAAAGTATCTTTGGTATCTAAAATACCTAAAGTTAGAGAAATTTTAGT
ACAAAAACAAAGGAAAATTGCTGAAGGTAAAAATGTAGTAATGGATGGGAGAGATATAGGTACGGTTGTGCTGCCTGATG
CACAGTTTAAGTTTTTTTTGACCGCTTCTTTAGAAGAAAGGGCAAAACGGCGTTATAGAGAACTTAAAACTAAAAATGTA
AATGTAAGTTATTACGAGGTGTTAAAAGAAATAGAAAATCGTGACACCATAGATTCACAGAGAGATACATCTCCTCTAAA
AATTGCTGAAGATTCTATTGTCATTGATACTACGTATCTTTCAGAAGAAGAAGTTGTAGAAAAACTGTACAATATCATAA
AGGAAGGATTAAAAGGGGAAATTTAA

Upstream 100 bases:

>100_bases
GTTGCGGTTTTTACAAATTTAAGTGAAGATAAAGAGGTTAAACACGTTTATTTGAAAGAAGCAAAAAAACTGCGTCCAGA
CTTAGTTTGAGGTGATAGTA

Downstream 100 bases:

>100_bases
GTATGTTTTATTATATTGCTAAAGTTATTGTACGGACAATCATAAAAGTGATATTTAGAATAGAAATACGAGGACTTGAA
AATATCCCTAAAAAAGGTCC

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTVKIAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQEKVNLIEENKIADIAQSADIILEGEKIFLDGKDI
SEEIRKPGVSEKVSLVSKIPKVREILVQKQRKIAEGKNVVMDGRDIGTVVLPDAQFKFFLTASLEERAKRRYRELKTKNV
NVSYYEVLKEIENRDTIDSQRDTSPLKIAEDSIVIDTTYLSEEEVVEKLYNIIKEGLKGEI

Sequences:

>Translated_221_residues
MTVKIAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQEKVNLIEENKIADIAQSADIILEGEKIFLDGKDI
SEEIRKPGVSEKVSLVSKIPKVREILVQKQRKIAEGKNVVMDGRDIGTVVLPDAQFKFFLTASLEERAKRRYRELKTKNV
NVSYYEVLKEIENRDTIDSQRDTSPLKIAEDSIVIDTTYLSEEEVVEKLYNIIKEGLKGEI
>Mature_220_residues
TVKIAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQEKVNLIEENKIADIAQSADIILEGEKIFLDGKDIS
EEIRKPGVSEKVSLVSKIPKVREILVQKQRKIAEGKNVVMDGRDIGTVVLPDAQFKFFLTASLEERAKRRYRELKTKNVN
VSYYEVLKEIENRDTIDSQRDTSPLKIAEDSIVIDTTYLSEEEVVEKLYNIIKEGLKGEI

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787139, Length=217, Percent_Identity=40.0921658986175, Blast_Score=171, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003136
- InterPro:   IPR011994
- InterPro:   IPR000623 [H]

Pfam domain/function: PF02224 Cytidylate_kin; PF01202 SKI [H]

EC number: =2.7.4.14 [H]

Molecular weight: Translated: 24885; Mature: 24754

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKIAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQEKVNLIEENKIADI
CEEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSADIILEGEKIFLDGKDISEEIRKPGVSEKVSLVSKIPKVREILVQKQRKIAEGKNVV
HHCCCEEEECCEEEECCCCHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEE
MDGRDIGTVVLPDAQFKFFLTASLEERAKRRYRELKTKNVNVSYYEVLKEIENRDTIDSQ
ECCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
RDTSPLKIAEDSIVIDTTYLSEEEVVEKLYNIIKEGLKGEI
CCCCCCEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVKIAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQEKVNLIEENKIADI
EEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSADIILEGEKIFLDGKDISEEIRKPGVSEKVSLVSKIPKVREILVQKQRKIAEGKNVV
HHCCCEEEECCEEEECCCCHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEE
MDGRDIGTVVLPDAQFKFFLTASLEERAKRRYRELKTKNVNVSYYEVLKEIENRDTIDSQ
ECCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
RDTSPLKIAEDSIVIDTTYLSEEEVVEKLYNIIKEGLKGEI
CCCCCCEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]