| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040235
Identifier: 167040235
GI number: 167040235
Start: 1616090
End: 1616887
Strand: Direct
Name: 167040235
Synonym: Teth514_1597
Alternate gene names: NA
Gene position: 1616090-1616887 (Clockwise)
Preceding gene: 167040234
Following gene: 167040236
Centisome position: 65.77
GC content: 38.85
Gene sequence:
>798_bases ATGCCGGAAAAAATAAATTATGAAAATCTCAAACCTTCGGAAGCAAGACAGCTGATTAGAGAAGGTGTTTTAACAGGGCC TACTGCTGGTATCGCTTTGGGATATACCCAGGCTAATCTTGTAATGCTTCCCAAAGAACTTGCTTATGATTTTCTTCTAT TTGCTTTTAGAAATCCAAAACCTTGTCCTATTCTCGATGTAACTGACGTAGGAAGTCCAGAACCAAAAGGAGTTGCAAAA GGAGCGGATCTGCGAACCGATATTCCCAAATACAGAATTTATAAAAAAGGTGTACTAGAAGCAGAAGTTAATGATATAAG AGATTACTGGCGCGATGATTTCGTAGCTTTTCTTTTGGGCTGTAGCTTTACGTTTGAAAAAGCTCTTCTAGAGAATGATA TTCCTGTAAGACATATTGAAGAAGGTAAAAATGTCCCTATGTATATTACCAATATAGAAACAAGGCCAGCAGGAATTTTT CATGGCTATATGGTGGTCAGTATGAGACCAATTCCTCAGAACCTTGTAGTAAGAGCTGTTCAGGTAACTTCGAGATTCCC ATCAGTTCACGGCGCTCCTGTTCATATAGGGGATCCTAAAGCTATAGGTATAGCTTCTCTTGATAAGCCGGATTTTGGCG ATCCTGTTGAGATAAAAGCAGGAGAAGTACCTGTTTTTTGGGCATGTGGAGTAACGCCACAAGCGGTGGCAATGAAATCA AAACCTGAAATTATGATAACTCATTCACCGGGACATATGTTTATTACAGATTTAAAAGATGAAATGTTAGCATGTTAA
Upstream 100 bases:
>100_bases AACCCCTTTGAGCTATGTTTTGATACGCAAACTAACAGTATATCAAAATATTGATTAACCAAAAAATTACATAAATAAAA AATGTTAAGGAGATGATCTT
Downstream 100 bases:
>100_bases AGAAAATTGCCTTTTAAATTGAGTTTTTCATTATCCTAGATAAAAAGCTAGAGTATAACATAAATAAAACGAGCCAGATT CCGCATCTCATGAATTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPEKINYENLKPSEARQLIREGVLTGPTAGIALGYTQANLVMLPKELAYDFLLFAFRNPKPCPILDVTDVGSPEPKGVAK GADLRTDIPKYRIYKKGVLEAEVNDIRDYWRDDFVAFLLGCSFTFEKALLENDIPVRHIEEGKNVPMYITNIETRPAGIF HGYMVVSMRPIPQNLVVRAVQVTSRFPSVHGAPVHIGDPKAIGIASLDKPDFGDPVEIKAGEVPVFWACGVTPQAVAMKS KPEIMITHSPGHMFITDLKDEMLAC
Sequences:
>Translated_265_residues MPEKINYENLKPSEARQLIREGVLTGPTAGIALGYTQANLVMLPKELAYDFLLFAFRNPKPCPILDVTDVGSPEPKGVAK GADLRTDIPKYRIYKKGVLEAEVNDIRDYWRDDFVAFLLGCSFTFEKALLENDIPVRHIEEGKNVPMYITNIETRPAGIF HGYMVVSMRPIPQNLVVRAVQVTSRFPSVHGAPVHIGDPKAIGIASLDKPDFGDPVEIKAGEVPVFWACGVTPQAVAMKS KPEIMITHSPGHMFITDLKDEMLAC >Mature_264_residues PEKINYENLKPSEARQLIREGVLTGPTAGIALGYTQANLVMLPKELAYDFLLFAFRNPKPCPILDVTDVGSPEPKGVAKG ADLRTDIPKYRIYKKGVLEAEVNDIRDYWRDDFVAFLLGCSFTFEKALLENDIPVRHIEEGKNVPMYITNIETRPAGIFH GYMVVSMRPIPQNLVVRAVQVTSRFPSVHGAPVHIGDPKAIGIASLDKPDFGDPVEIKAGEVPVFWACGVTPQAVAMKSK PEIMITHSPGHMFITDLKDEMLAC
Specific function: Unknown
COG id: COG4336
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0317 family
Homologues:
Organism=Homo sapiens, GI156139135, Length=268, Percent_Identity=31.7164179104478, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI156139133, Length=268, Percent_Identity=31.3432835820896, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI156139131, Length=268, Percent_Identity=31.3432835820896, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI156139129, Length=268, Percent_Identity=31.3432835820896, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI156139137, Length=268, Percent_Identity=28.7313432835821, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1160_THEP3 (B0K9K2)
Other databases:
- EMBL: CP000924 - RefSeq: YP_001665151.1 - ProteinModelPortal: B0K9K2 - SMR: B0K9K2 - GeneID: 5875263 - GenomeReviews: CP000924_GR - KEGG: tpd:Teth39_1160 - HOGENOM: HBG289473 - OMA: GPMVVSM - ProtClustDB: PRK05463 - BioCyc: TPSE340099:TETH39_1160-MONOMER - HAMAP: MF_01830 - InterPro: IPR009906 - InterPro: IPR016938 - PIRSF: PIRSF029755
Pfam domain/function: PF07286 DUF1445
EC number: NA
Molecular weight: Translated: 29346; Mature: 29215
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKINYENLKPSEARQLIREGVLTGPTAGIALGYTQANLVMLPKELAYDFLLFAFRNPK CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHCCCCC PCPILDVTDVGSPEPKGVAKGADLRTDIPKYRIYKKGVLEAEVNDIRDYWRDDFVAFLLG CCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH CSFTFEKALLENDIPVRHIEEGKNVPMYITNIETRPAGIFHGYMVVSMRPIPQNLVVRAV CCHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHH QVTSRFPSVHGAPVHIGDPKAIGIASLDKPDFGDPVEIKAGEVPVFWACGVTPQAVAMKS HHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEECCCCCEEEECCCCHHHEEECC KPEIMITHSPGHMFITDLKDEMLAC CCCEEEEECCCCEEEEECCHHHHCC >Mature Secondary Structure PEKINYENLKPSEARQLIREGVLTGPTAGIALGYTQANLVMLPKELAYDFLLFAFRNPK CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHCCCCC PCPILDVTDVGSPEPKGVAKGADLRTDIPKYRIYKKGVLEAEVNDIRDYWRDDFVAFLLG CCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH CSFTFEKALLENDIPVRHIEEGKNVPMYITNIETRPAGIFHGYMVVSMRPIPQNLVVRAV CCHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHH QVTSRFPSVHGAPVHIGDPKAIGIASLDKPDFGDPVEIKAGEVPVFWACGVTPQAVAMKS HHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEECCCCCEEEECCCCHHHEEECC KPEIMITHSPGHMFITDLKDEMLAC CCCEEEEECCCCEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA