| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is hexR [C]
Identifier: 167040228
GI number: 167040228
Start: 1607734
End: 1608597
Strand: Direct
Name: hexR [C]
Synonym: Teth514_1590
Alternate gene names: 167040228
Gene position: 1607734-1608597 (Clockwise)
Preceding gene: 167040227
Following gene: 167040229
Centisome position: 65.43
GC content: 32.29
Gene sequence:
>864_bases ATGGCAAAAACAGATGATTTGATAAAAAGGATACAAGATAATTATACAAAATTAAGCAAAAGCCAAAAGATAATAGCAGA GTACATTATAAATCATTATGATAAGGCAGCTTTTATGACAGCTGCAAAATTGGGAGCCAGCATAAATATAAGTGAATCAA CTGTTGTAAGATTTGCTAATACTTTAGGCTATAATGGATATCCAGAACTTCAAAATGCACTGCAAGAGCTTATAAAAAAT AAACTTACAACAGTCCAAAGGTTAGAAATGACAGAAGAGACAGATGAAATTGCTATATTGAATAATGTACTAAAAGCCGA CATAGAAAACATAAAAGAGACCATAAATGAAATAAATAAGGATGACTTTAGAAGAGTCGTTTCAGATATCATCAATGCTA CAAAAATTTATATAATAGGTTCCAGAAGTTCTATTGTCATTGCAGAATATTTGGGATTTTATTTAAATTTAATACGGGAA AATGTGTCAGTCGTTAAAGCGGGCGTATCAGATGTTTTCGAGCAAATTCTCAGAGTTAGTGAAAATGATTTAGTGATAGG AATTGGTTTTCCGAGATACTCAAAAAGAACATTAGATGTGCTGAAATATGCAAAATCTCAGAATGCAAAAATCGTTACAA TAACAGATAGCTTGATTTCTCCTCTTACCTCTGTTGCTGATGAGATATTAATTGCGAAAAGCAACATGGCTTCTTTTGTG GATTCATTAGTGGCACCTTTAAGTCTTGTCAATGCTCTTGTGGTAGCTGTGGGCCTTAGAGAAAAGGAAAAGATAGCCGA TACTTTTGAAAAATTAGAGAGTATTTGGGATGAATATGGGGTATATTTCTCAAAACCAAATTAA
Upstream 100 bases:
>100_bases AAAGAGCTGTTTTAAATAGAGTACCTCCAGCCACAGAAGAGATTAACAAAAGAGCATTGAGAGAAGGCTATAATCTTGTA AAAATGAGGGGTAGTGAAAT
Downstream 100 bases:
>100_bases TTATAAAATTTTGAAGGGTTATTAAAAATTTTGTAGAATATATAACATAGAAATCGATTCATTTGCTTCAAAATTTTAAA ATTAGGAGGATAATAAAATG
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAKTDDLIKRIQDNYTKLSKSQKIIAEYIINHYDKAAFMTAAKLGASINISESTVVRFANTLGYNGYPELQNALQELIKN KLTTVQRLEMTEETDEIAILNNVLKADIENIKETINEINKDDFRRVVSDIINATKIYIIGSRSSIVIAEYLGFYLNLIRE NVSVVKAGVSDVFEQILRVSENDLVIGIGFPRYSKRTLDVLKYAKSQNAKIVTITDSLISPLTSVADEILIAKSNMASFV DSLVAPLSLVNALVVAVGLREKEKIADTFEKLESIWDEYGVYFSKPN
Sequences:
>Translated_287_residues MAKTDDLIKRIQDNYTKLSKSQKIIAEYIINHYDKAAFMTAAKLGASINISESTVVRFANTLGYNGYPELQNALQELIKN KLTTVQRLEMTEETDEIAILNNVLKADIENIKETINEINKDDFRRVVSDIINATKIYIIGSRSSIVIAEYLGFYLNLIRE NVSVVKAGVSDVFEQILRVSENDLVIGIGFPRYSKRTLDVLKYAKSQNAKIVTITDSLISPLTSVADEILIAKSNMASFV DSLVAPLSLVNALVVAVGLREKEKIADTFEKLESIWDEYGVYFSKPN >Mature_286_residues AKTDDLIKRIQDNYTKLSKSQKIIAEYIINHYDKAAFMTAAKLGASINISESTVVRFANTLGYNGYPELQNALQELIKNK LTTVQRLEMTEETDEIAILNNVLKADIENIKETINEINKDDFRRVVSDIINATKIYIIGSRSSIVIAEYLGFYLNLIREN VSVVKAGVSDVFEQILRVSENDLVIGIGFPRYSKRTLDVLKYAKSQNAKIVTITDSLISPLTSVADEILIAKSNMASFVD SLVAPLSLVNALVVAVGLREKEKIADTFEKLESIWDEYGVYFSKPN
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788159, Length=283, Percent_Identity=22.9681978798587, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI87082130, Length=194, Percent_Identity=23.7113402061856, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 32142; Mature: 32011
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTDDLIKRIQDNYTKLSKSQKIIAEYIINHYDKAAFMTAAKLGASINISESTVVRFAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH TLGYNGYPELQNALQELIKNKLTTVQRLEMTEETDEIAILNNVLKADIENIKETINEINK HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCH DDFRRVVSDIINATKIYIIGSRSSIVIAEYLGFYLNLIRENVSVVKAGVSDVFEQILRVS HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ENDLVIGIGFPRYSKRTLDVLKYAKSQNAKIVTITDSLISPLTSVADEILIAKSNMASFV CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH DSLVAPLSLVNALVVAVGLREKEKIADTFEKLESIWDEYGVYFSKPN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEECCCC >Mature Secondary Structure AKTDDLIKRIQDNYTKLSKSQKIIAEYIINHYDKAAFMTAAKLGASINISESTVVRFAN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH TLGYNGYPELQNALQELIKNKLTTVQRLEMTEETDEIAILNNVLKADIENIKETINEINK HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCH DDFRRVVSDIINATKIYIIGSRSSIVIAEYLGFYLNLIRENVSVVKAGVSDVFEQILRVS HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ENDLVIGIGFPRYSKRTLDVLKYAKSQNAKIVTITDSLISPLTSVADEILIAKSNMASFV CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH DSLVAPLSLVNALVVAVGLREKEKIADTFEKLESIWDEYGVYFSKPN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]