| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is ytfJ [H]
Identifier: 167040208
GI number: 167040208
Start: 1589000
End: 1589446
Strand: Direct
Name: ytfJ [H]
Synonym: Teth514_1570
Alternate gene names: 167040208
Gene position: 1589000-1589446 (Clockwise)
Preceding gene: 167040207
Following gene: 167040209
Centisome position: 64.67
GC content: 38.03
Gene sequence:
>447_bases ATGAGTGACCACCCAATCGATGCATTGATGAAAACGACTATGGAAAGCTTAAAAGACATGATAGATGTCAATACAATAGT AGGAGATGCTGTAGAAACTCCTGATGGAACGATAATAATCCCTATTTCCCGTGTGACCTTTGGCTTTGTCGCTGGAGGCG GTGAAATTAACTTGCCAAAGAATGATAAAAAAGGTACAGAACAAGATTCATCTCAAAGCATGCCATTTGCAGGTGGCAGT GGTGCAGGGGTTTCTGTACAACCTGTTGCCTTTATGGTGGTTGGACAAGGGCAAATCAGACTCTTGCCAGTTACTCAAAG TGCTATGTTAGAGAGAATAATAGACTTGACGCCTAAATTGATAGAAGAAATACAAAACTTGTTCAATAAAAGTAAGTCGA CAAAAAAGACACAAAATCCAATAATAAATAACAATGTTGATATTTAA
Upstream 100 bases:
>100_bases AAATTTAATTTGCATATTTAAAATAACCTGTGGTAATATTATTATTAATGGAATAAAGTTTTTGGAGTTTTTGGGTAGTT TAAAGGGGAGGTGAAAATAA
Downstream 100 bases:
>100_bases AAAGTGGGAAACCCCACTTTTTTGTGTATAAAGCATTCCTTTTGTATTTTTAAAAAACATGCCTTGCTTTGAGTTATCAT TAAATTCCACATAGATAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSDHPIDALMKTTMESLKDMIDVNTIVGDAVETPDGTIIIPISRVTFGFVAGGGEINLPKNDKKGTEQDSSQSMPFAGGS GAGVSVQPVAFMVVGQGQIRLLPVTQSAMLERIIDLTPKLIEEIQNLFNKSKSTKKTQNPIINNNVDI
Sequences:
>Translated_148_residues MSDHPIDALMKTTMESLKDMIDVNTIVGDAVETPDGTIIIPISRVTFGFVAGGGEINLPKNDKKGTEQDSSQSMPFAGGS GAGVSVQPVAFMVVGQGQIRLLPVTQSAMLERIIDLTPKLIEEIQNLFNKSKSTKKTQNPIINNNVDI >Mature_147_residues SDHPIDALMKTTMESLKDMIDVNTIVGDAVETPDGTIIIPISRVTFGFVAGGGEINLPKNDKKGTEQDSSQSMPFAGGSG AGVSVQPVAFMVVGQGQIRLLPVTQSAMLERIIDLTPKLIEEIQNLFNKSKSTKKTQNPIINNNVDI
Specific function: Unknown
COG id: COG3874
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Spore core (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014229 [H]
Pfam domain/function: PF09579 Spore_YtfJ [H]
EC number: NA
Molecular weight: Translated: 15868; Mature: 15737
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHPIDALMKTTMESLKDMIDVNTIVGDAVETPDGTIIIPISRVTFGFVAGGGEINLPK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCEEEEEECCCEECCCC NDKKGTEQDSSQSMPFAGGSGAGVSVQPVAFMVVGQGQIRLLPVTQSAMLERIIDLTPKL CCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECCHHHHHHHHHCCCHHH IEEIQNLFNKSKSTKKTQNPIINNNVDI HHHHHHHHHCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure SDHPIDALMKTTMESLKDMIDVNTIVGDAVETPDGTIIIPISRVTFGFVAGGGEINLPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCEEEEEECCCEECCCC NDKKGTEQDSSQSMPFAGGSGAGVSVQPVAFMVVGQGQIRLLPVTQSAMLERIIDLTPKL CCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECCHHHHHHHHHCCCHHH IEEIQNLFNKSKSTKKTQNPIINNNVDI HHHHHHHHHCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]