| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is spoVAC [H]
Identifier: 167040199
GI number: 167040199
Start: 1582251
End: 1582697
Strand: Direct
Name: spoVAC [H]
Synonym: Teth514_1561
Alternate gene names: 167040199
Gene position: 1582251-1582697 (Clockwise)
Preceding gene: 167040198
Following gene: 167040200
Centisome position: 64.39
GC content: 34.9
Gene sequence:
>447_bases ATGGAAAGAGATGTAAAAAAAGAGCAAGAATATAAAAACATAGCACAGAAATATGAGCCTAAACCTGCTTTGCTTAAAAA CGTAGTAATGGCTTTTGTAGTAGGAGGATTGATAAGCGACATAGGGCAGTTCTTTTTAAATTTTTACCTATCAAGAGGTT ATTCTATGCAAGATGCCAATACTCTTGTATCAATTACTATGGTATTTCTTGGAGCTTTTTTAACTGGAATTGGGGTCTAT GACGATATAGGGAAGTTTGCAGGGGCAGGTTCTATAGTGCCAATAACAGGTTTTGCAAATTCTATTGTGTCACCGGCAAT GGAGTTTAAAAGGGAAGGTTTTGTTTTTGGGGCGGCAGCTAAGATGTTTACAATTGCAGGACCTGTTATTGTATATGGTG TAAGTACTTCAATTATTATAGGTTTGATATATTATTTTTTGAAGTAA
Upstream 100 bases:
>100_bases AAAGCTAATATACAAATAGCTTATAGAGCAGATAAAGAATTAGATTGAAAATAAAGGAGCACCGTCTATGGTGCTCTTGT CATAAGAAAGGGTGAAATTA
Downstream 100 bases:
>100_bases AAGGGGAAGTTAGATATGGCGGAGAAAAAATTAGGTACACAAACTGTTAAGTTTAAAAATCCTCCTTCTATAATAGCTGG AGGCACTATTGTAGGACCTA
Product: SpoVA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MERDVKKEQEYKNIAQKYEPKPALLKNVVMAFVVGGLISDIGQFFLNFYLSRGYSMQDANTLVSITMVFLGAFLTGIGVY DDIGKFAGAGSIVPITGFANSIVSPAMEFKREGFVFGAAAKMFTIAGPVIVYGVSTSIIIGLIYYFLK
Sequences:
>Translated_148_residues MERDVKKEQEYKNIAQKYEPKPALLKNVVMAFVVGGLISDIGQFFLNFYLSRGYSMQDANTLVSITMVFLGAFLTGIGVY DDIGKFAGAGSIVPITGFANSIVSPAMEFKREGFVFGAAAKMFTIAGPVIVYGVSTSIIIGLIYYFLK >Mature_148_residues MERDVKKEQEYKNIAQKYEPKPALLKNVVMAFVVGGLISDIGQFFLNFYLSRGYSMQDANTLVSITMVFLGAFLTGIGVY DDIGKFAGAGSIVPITGFANSIVSPAMEFKREGFVFGAAAKMFTIAGPVIVYGVSTSIIIGLIYYFLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014203 - InterPro: IPR005562 [H]
Pfam domain/function: PF03862 SpoVA [H]
EC number: NA
Molecular weight: Translated: 16137; Mature: 16137
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDVKKEQEYKNIAQKYEPKPALLKNVVMAFVVGGLISDIGQFFLNFYLSRGYSMQDAN CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TLVSITMVFLGAFLTGIGVYDDIGKFAGAGSIVPITGFANSIVSPAMEFKREGFVFGAAA HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHH KMFTIAGPVIVYGVSTSIIIGLIYYFLK HHHHHHCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MERDVKKEQEYKNIAQKYEPKPALLKNVVMAFVVGGLISDIGQFFLNFYLSRGYSMQDAN CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TLVSITMVFLGAFLTGIGVYDDIGKFAGAGSIVPITGFANSIVSPAMEFKREGFVFGAAA HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHH KMFTIAGPVIVYGVSTSIIIGLIYYFLK HHHHHHCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]