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The map label for this gene is ysdA [H]

Identifier: 167040052

GI number: 167040052

Start: 1448520

End: 1448786

Strand: Direct

Name: ysdA [H]

Synonym: Teth514_1412

Alternate gene names: 167040052

Gene position: 1448520-1448786 (Clockwise)

Preceding gene: 167040050

Following gene: 167040053

Centisome position: 58.95

GC content: 28.46

Gene sequence:

>267_bases
ATGAACAAGATTGCAATGATTGCTTTATTAACTTTAAATGTATTTTCTTTTGTTTTAATGGGTATTGATAAATATAAAGC
GATGCATAAACTTTGGAGAATAAGTGAAAAGACCTTTTTCTTTTTAGCACTATTTGGTGGTTCAATAGGCGTATGGATTG
GCATGTGTTTTTTTAGACATAAGACAAGACATAAATTATTTGTATTTGGCATACCGATGATTATTCTTTGTCAAATTGTT
TTAGTTGCTGTCATAAAATACTGGTAA

Upstream 100 bases:

>100_bases
CCATTTCAACACCTCTCAATATTTTTCATAGTTTTATGATAGCTATATTTTGAGTTTTTATACCTTTTATAAAGTGGTAT
AATTGTTATGAGGTGTTATA

Downstream 100 bases:

>100_bases
AATAGTGCATATAATAAAAACTTTTAAGGGTCTGTGCAAAATGTCAGCATATTATTCACCTACTAGCTTTTGACACACAC
CTTTTAAGGAAAATTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNKIAMIALLTLNVFSFVLMGIDKYKAMHKLWRISEKTFFFLALFGGSIGVWIGMCFFRHKTRHKLFVFGIPMIILCQIV
LVAVIKYW

Sequences:

>Translated_88_residues
MNKIAMIALLTLNVFSFVLMGIDKYKAMHKLWRISEKTFFFLALFGGSIGVWIGMCFFRHKTRHKLFVFGIPMIILCQIV
LVAVIKYW
>Mature_88_residues
MNKIAMIALLTLNVFSFVLMGIDKYKAMHKLWRISEKTFFFLALFGGSIGVWIGMCFFRHKTRHKLFVFGIPMIILCQIV
LVAVIKYW

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 10304; Mature: 10304

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIAMIALLTLNVFSFVLMGIDKYKAMHKLWRISEKTFFFLALFGGSIGVWIGMCFFRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
KTRHKLFVFGIPMIILCQIVLVAVIKYW
CCCCEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKIAMIALLTLNVFSFVLMGIDKYKAMHKLWRISEKTFFFLALFGGSIGVWIGMCFFRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
KTRHKLFVFGIPMIILCQIVLVAVIKYW
CCCCEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]