| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yhfA [H]
Identifier: 167040051
GI number: 167040051
Start: 1447068
End: 1448423
Strand: Reverse
Name: yhfA [H]
Synonym: Teth514_1411
Alternate gene names: 167040051
Gene position: 1448423-1447068 (Counterclockwise)
Preceding gene: 167040054
Following gene: 167040048
Centisome position: 58.94
GC content: 33.78
Gene sequence:
>1356_bases ATGGTTACCTTGACTGCATCCCACATAGCATATCTAATAATGATTTTAATTATATTGATTTTACTTTTAATGAGAAAAGA TATAATTCTACCCATAATATTAGCAATATTTTTAATTGGATTTCTATCAACTGGAAATATCTTAAAAGCCGTTCAAATAC TCTACACTGCAATTTTTGTGTCAGGAAAAAGGCTGTGGCAAATCATAGTAATAATATCTCTTATAATATCTATGTCAAAA GCTTTAGATGACATAGGCGCAGATATAATCATAACAAAACCTTTTATAAAATATTTAAAAACTCCTACTTTTTCTTTTTG GATAATAGGTTTTTTAACGATGTTTTTATCATTTTTTATATGGCCTGCACCTGCAGTCGGTTTAATCGGTACAGTCCTCA TCAACCCCGCTTTAAAGTCGGGTATTGACAAAGTAAGCCTTGCCGCTATTGTTTCAATTTTCGGCTTTGGAGCAGCATTA TCGGGAGACTTTTTCATACAAGGAGCTCCCTCTATAACAGCCAGGGCAGCAGGTATACCAATTCATACATTGATATTGAC AAGCTTACCTATTTGGGCTACAGCCTCAACTGTAAGCATTCTTATACTTTATTTTAGCACATTGCAGCAAAGTAAAATAC AACAGCAAAACAATCATTTAGATGTTAATAGCATTGACAAACCTTCTCCTCCTTTTAGTAGTTTTGTGGTTTCAATAATC GCAGTAGTACTTTTTATTTTGGATATAATTCTGATGCTCTTATTTAGAATTCACTCTAACGCGGCCACTGCTTTGATAGG AGGAACATCTATAATAGTTTTAATTGCCTCTACAATAGTACAAAAAAATTTTTTAGACAAAACCCGCGAATATTTAAGAG AAGGTTTTATAACTGGAATGAGAACCTTTTCCCCAATTATAGTCATCAGCGCTTTTTTTCTCCTTGGAGAAACAAGCATG GCAAAGGAAGTTATAAGTCCTCATGCAAAAGGATATCTTGTAGATTTAGGAATGTATTTATCTCAGCACATTCCATTAAA TAAGTACACTGTTTCTTTATTAGAATTTTCATTAGGAGTTCTGACTGGTTTATCTGGTTCTGGATTCTCAGGCCTTCCTT TAATAGGTGCTATTGCTAAAACAATTTCTTCAACTTTAAATCTAAACCCGGCAATTTTAGCTTCTATAGGGCAGATAGCC GCAATATGGACAGGAGGTGGTACAATAATACCTTGGAGTACCGTAGCTGTTTCTACAGTAATAGACGTAGAAGCCGAAAA AATCGCTAAAAAAAACATGGTACCTGCAATAGCAGGTCTTATAGCAGCATATTTTGTGACAATATTTTTATTATAA
Upstream 100 bases:
>100_bases TCATTATAACACCTCATAACAATTATACCACTTTATAAAAGGTATAAAAACTCAAAATATAGCTATCATAAAACTATGAA AAATATTGAGAGGTGTTGAA
Downstream 100 bases:
>100_bases TTACAAAGCCGAGGACTAAACCTCGGCTTTTAAGATATTCCCCTCATTATCAAATTCATCATACTGTCTTTCTCCTCATT GCTCAACTTTTCCCACGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MVTLTASHIAYLIMILIILILLLMRKDIILPIILAIFLIGFLSTGNILKAVQILYTAIFVSGKRLWQIIVIISLIISMSK ALDDIGADIIITKPFIKYLKTPTFSFWIIGFLTMFLSFFIWPAPAVGLIGTVLINPALKSGIDKVSLAAIVSIFGFGAAL SGDFFIQGAPSITARAAGIPIHTLILTSLPIWATASTVSILILYFSTLQQSKIQQQNNHLDVNSIDKPSPPFSSFVVSII AVVLFILDIILMLLFRIHSNAATALIGGTSIIVLIASTIVQKNFLDKTREYLREGFITGMRTFSPIIVISAFFLLGETSM AKEVISPHAKGYLVDLGMYLSQHIPLNKYTVSLLEFSLGVLTGLSGSGFSGLPLIGAIAKTISSTLNLNPAILASIGQIA AIWTGGGTIIPWSTVAVSTVIDVEAEKIAKKNMVPAIAGLIAAYFVTIFLL
Sequences:
>Translated_451_residues MVTLTASHIAYLIMILIILILLLMRKDIILPIILAIFLIGFLSTGNILKAVQILYTAIFVSGKRLWQIIVIISLIISMSK ALDDIGADIIITKPFIKYLKTPTFSFWIIGFLTMFLSFFIWPAPAVGLIGTVLINPALKSGIDKVSLAAIVSIFGFGAAL SGDFFIQGAPSITARAAGIPIHTLILTSLPIWATASTVSILILYFSTLQQSKIQQQNNHLDVNSIDKPSPPFSSFVVSII AVVLFILDIILMLLFRIHSNAATALIGGTSIIVLIASTIVQKNFLDKTREYLREGFITGMRTFSPIIVISAFFLLGETSM AKEVISPHAKGYLVDLGMYLSQHIPLNKYTVSLLEFSLGVLTGLSGSGFSGLPLIGAIAKTISSTLNLNPAILASIGQIA AIWTGGGTIIPWSTVAVSTVIDVEAEKIAKKNMVPAIAGLIAAYFVTIFLL >Mature_451_residues MVTLTASHIAYLIMILIILILLLMRKDIILPIILAIFLIGFLSTGNILKAVQILYTAIFVSGKRLWQIIVIISLIISMSK ALDDIGADIIITKPFIKYLKTPTFSFWIIGFLTMFLSFFIWPAPAVGLIGTVLINPALKSGIDKVSLAAIVSIFGFGAAL SGDFFIQGAPSITARAAGIPIHTLILTSLPIWATASTVSILILYFSTLQQSKIQQQNNHLDVNSIDKPSPPFSSFVVSII AVVLFILDIILMLLFRIHSNAATALIGGTSIIVLIASTIVQKNFLDKTREYLREGFITGMRTFSPIIVISAFFLLGETSM AKEVISPHAKGYLVDLGMYLSQHIPLNKYTVSLLEFSLGVLTGLSGSGFSGLPLIGAIAKTISSTLNLNPAILASIGQIA AIWTGGGTIIPWSTVAVSTVIDVEAEKIAKKNMVPAIAGLIAAYFVTIFLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48539; Mature: 48539
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLTASHIAYLIMILIILILLLMRKDIILPIILAIFLIGFLSTGNILKAVQILYTAIFV CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SGKRLWQIIVIISLIISMSKALDDIGADIIITKPFIKYLKTPTFSFWIIGFLTMFLSFFI HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHH WPAPAVGLIGTVLINPALKSGIDKVSLAAIVSIFGFGAALSGDFFIQGAPSITARAAGIP CCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHCCHHCCCCEEEECCCCCHHHHCCCC IHTLILTSLPIWATASTVSILILYFSTLQQSKIQQQNNHLDVNSIDKPSPPFSSFVVSII HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH AVVLFILDIILMLLFRIHSNAATALIGGTSIIVLIASTIVQKNFLDKTREYLREGFITGM HHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTFSPIIVISAFFLLGETSMAKEVISPHAKGYLVDLGMYLSQHIPLNKYTVSLLEFSLGV HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTGLSGSGFSGLPLIGAIAKTISSTLNLNPAILASIGQIAAIWTGGGTIIPWSTVAVSTV HHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCEECCHHHHHHHH IDVEAEKIAKKNMVPAIAGLIAAYFVTIFLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTLTASHIAYLIMILIILILLLMRKDIILPIILAIFLIGFLSTGNILKAVQILYTAIFV CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SGKRLWQIIVIISLIISMSKALDDIGADIIITKPFIKYLKTPTFSFWIIGFLTMFLSFFI HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHH WPAPAVGLIGTVLINPALKSGIDKVSLAAIVSIFGFGAALSGDFFIQGAPSITARAAGIP CCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHCCHHCCCCEEEECCCCCHHHHCCCC IHTLILTSLPIWATASTVSILILYFSTLQQSKIQQQNNHLDVNSIDKPSPPFSSFVVSII HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH AVVLFILDIILMLLFRIHSNAATALIGGTSIIVLIASTIVQKNFLDKTREYLREGFITGM HHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTFSPIIVISAFFLLGETSMAKEVISPHAKGYLVDLGMYLSQHIPLNKYTVSLLEFSLGV HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTGLSGSGFSGLPLIGAIAKTISSTLNLNPAILASIGQIAAIWTGGGTIIPWSTVAVSTV HHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCEECCHHHHHHHH IDVEAEKIAKKNMVPAIAGLIAAYFVTIFLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]