Click here to switch to the map view.

The map label for this gene is yoaR [H]

Identifier: 167039944

GI number: 167039944

Start: 1336889

End: 1338364

Strand: Direct

Name: yoaR [H]

Synonym: Teth514_1300

Alternate gene names: 167039944

Gene position: 1336889-1338364 (Clockwise)

Preceding gene: 167039943

Following gene: 167039946

Centisome position: 54.41

GC content: 31.78

Gene sequence:

>1476_bases
ATGCAAGCGAAGGGTGGTACTAAAAAAAATAATTATTTTTATATTGCAATTATTTTATTGCTTTTGATTTTTTTATCCTT
TTCTTTTGCGTATTTTTATTTAATGCTCAATTCTAAAGTTATTGCAAAGGGAATTTTTGTAAATGGCATAAGCATAGGAG
GGATGACAAAAGAGGAATCGGTAAATTTTCTTAAAGATAAGATAAAAATTTCTTCTTTTTCCGTTACAGCTAAGTATCAA
GATAAAATTTTTGTTATCACATCAGAAGATATCAATTTATCTTATAACTATCAAGAAATGGTAGAAGAGGCTTACAAAAT
AGGTAGAGAAGGAAATCCTGTTGAAAGAATAAGAGAAATTTATGTAACAGAAAAAGAAGGAAAATATTTTAGCTTTTATC
CCAAGTACGATGAAAATAAATTAAAAGAGTTTGTTAATAGAATTTCTCAAGAGATTGATAAAGAGCCAATTAATGCGAAA
ATAAAAATTACAAGAGGAGTAAAACAAATTACACCAGATGTAGAGGGTGTAAAAGTTAATAAAGACAAAACTTTAAAAAA
TTTAAAACAGCTTATGGATGAGTTAATAAAAGGAGAGACAGAGAAGCCAGAAGTAGAGATTGTTGCGGATAAAGTTGAAG
CAAAAGTTACAAAATCAATGCTAGAAATGATTAATGGACGAATTTCTACTTTTTCTACTGTATTTAATCTTCAAGATGCA
AACCGTTCAGGGAATATAGCAGTGGCGGCAAGAGCTGTAAACGGTACCTTGCTTATGCCAGGTGAGACATTTTCTCTTAA
TAAAACTTTAGGGCCGAGAATAATACAAAACGGTTACAAAGAAGCCCCCGTGATAATAGGCAATAAACTTGTACCGGATA
TAGGAGGAGGAGTATGCCAAATTGCTACAACCTTGTATAATGCAATTTTACGAGCGGATATAGCAATTACTGAAAGATAC
CATCACAGTTTTCCGGTAGCTTATGTACCACCAGGACAAGATGCTACTATTTCGGGAGATGTTTTAGATTTAAAATTTAA
AAATTCTACTCAATATCCCATATATATTGAATCCTACATAGAAGGCAACAAATTAGTAATGAACATATATGGTTATGTGA
AAAATCCTTCAAGATGGATAGATATTCAGTCAGAGATTGTTGAAAAATATGAGCCTAAAATAAAATATATAGATGACCCG
ACCTTGCCCCAAGGAGAAGAGGTTGTGGATATACAGCCCCATACTGGCTATAAAGTCAATACATATCGTTTGATTTATGA
AAATAACAAATTAGTTAAAAGAGAATTTTTATATACAGATGTGTATAAGCCAGTAGATGGAGTAATTAAAAGAGGAACTA
AAAAAGTAGAAAATTCAAAATCTCAAGAGCCACCTAAAACAGAAAAGGAAAATAATGCTCAAGTTAATCCGGAGCCACCA
CAGGATAATTCAGAAGAAGATCCTGCTCAGCCATAG

Upstream 100 bases:

>100_bases
AATATTTTTGTAACTTTTTTAAGAAATTATTAATTGTATTATAAAGCTAATTATAATATCATACTATTGTAAATGGAAGA
AATGAATAGGAGAGAAGAAA

Downstream 100 bases:

>100_bases
CATGAAAGCACCTCCCATTTTTATCAATAAAAATGGGAGGTGCTATTTAATTATTAATATTAAGTTTATGCTGGCAAGCC
GGACAATAACCGTAGAAATA

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MQAKGGTKKNNYFYIAIILLLLIFLSFSFAYFYLMLNSKVIAKGIFVNGISIGGMTKEESVNFLKDKIKISSFSVTAKYQ
DKIFVITSEDINLSYNYQEMVEEAYKIGREGNPVERIREIYVTEKEGKYFSFYPKYDENKLKEFVNRISQEIDKEPINAK
IKITRGVKQITPDVEGVKVNKDKTLKNLKQLMDELIKGETEKPEVEIVADKVEAKVTKSMLEMINGRISTFSTVFNLQDA
NRSGNIAVAARAVNGTLLMPGETFSLNKTLGPRIIQNGYKEAPVIIGNKLVPDIGGGVCQIATTLYNAILRADIAITERY
HHSFPVAYVPPGQDATISGDVLDLKFKNSTQYPIYIESYIEGNKLVMNIYGYVKNPSRWIDIQSEIVEKYEPKIKYIDDP
TLPQGEEVVDIQPHTGYKVNTYRLIYENNKLVKREFLYTDVYKPVDGVIKRGTKKVENSKSQEPPKTEKENNAQVNPEPP
QDNSEEDPAQP

Sequences:

>Translated_491_residues
MQAKGGTKKNNYFYIAIILLLLIFLSFSFAYFYLMLNSKVIAKGIFVNGISIGGMTKEESVNFLKDKIKISSFSVTAKYQ
DKIFVITSEDINLSYNYQEMVEEAYKIGREGNPVERIREIYVTEKEGKYFSFYPKYDENKLKEFVNRISQEIDKEPINAK
IKITRGVKQITPDVEGVKVNKDKTLKNLKQLMDELIKGETEKPEVEIVADKVEAKVTKSMLEMINGRISTFSTVFNLQDA
NRSGNIAVAARAVNGTLLMPGETFSLNKTLGPRIIQNGYKEAPVIIGNKLVPDIGGGVCQIATTLYNAILRADIAITERY
HHSFPVAYVPPGQDATISGDVLDLKFKNSTQYPIYIESYIEGNKLVMNIYGYVKNPSRWIDIQSEIVEKYEPKIKYIDDP
TLPQGEEVVDIQPHTGYKVNTYRLIYENNKLVKREFLYTDVYKPVDGVIKRGTKKVENSKSQEPPKTEKENNAQVNPEPP
QDNSEEDPAQP
>Mature_491_residues
MQAKGGTKKNNYFYIAIILLLLIFLSFSFAYFYLMLNSKVIAKGIFVNGISIGGMTKEESVNFLKDKIKISSFSVTAKYQ
DKIFVITSEDINLSYNYQEMVEEAYKIGREGNPVERIREIYVTEKEGKYFSFYPKYDENKLKEFVNRISQEIDKEPINAK
IKITRGVKQITPDVEGVKVNKDKTLKNLKQLMDELIKGETEKPEVEIVADKVEAKVTKSMLEMINGRISTFSTVFNLQDA
NRSGNIAVAARAVNGTLLMPGETFSLNKTLGPRIIQNGYKEAPVIIGNKLVPDIGGGVCQIATTLYNAILRADIAITERY
HHSFPVAYVPPGQDATISGDVLDLKFKNSTQYPIYIESYIEGNKLVMNIYGYVKNPSRWIDIQSEIVEKYEPKIKYIDDP
TLPQGEEVVDIQPHTGYKVNTYRLIYENNKLVKREFLYTDVYKPVDGVIKRGTKKVENSKSQEPPKTEKENNAQVNPEPP
QDNSEEDPAQP

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 55725; Mature: 55725

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKGGTKKNNYFYIAIILLLLIFLSFSFAYFYLMLNSKVIAKGIFVNGISIGGMTKEES
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHH
VNFLKDKIKISSFSVTAKYQDKIFVITSEDINLSYNYQEMVEEAYKIGREGNPVERIREI
HHHHHHHEEEEEEEEEEEECCEEEEEEECCCCEEECHHHHHHHHHHCCCCCCHHHHHHHH
YVTEKEGKYFSFYPKYDENKLKEFVNRISQEIDKEPINAKIKITRGVKQITPDVEGVKVN
EEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCEEEC
KDKTLKNLKQLMDELIKGETEKPEVEIVADKVEAKVTKSMLEMINGRISTFSTVFNLQDA
CHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECC
NRSGNIAVAARAVNGTLLMPGETFSLNKTLGPRIIQNGYKEAPVIIGNKLVPDIGGGVCQ
CCCCCEEEEEEEECCEEEECCCCEECCCCCCHHHHHCCCCCCCEEECCEECCCCCCHHHH
IATTLYNAILRADIAITERYHHSFPVAYVPPGQDATISGDVLDLKFKNSTQYPIYIESYI
HHHHHHHHHHHHHHHEEHHHCCCCCEEEECCCCCCEECCCEEEEEECCCCCCCEEEEEEC
EGNKLVMNIYGYVKNPSRWIDIQSEIVEKYEPKIKYIDDPTLPQGEEVVDIQPHTGYKVN
CCCEEEEEEEEEECCCCCEEECHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCEEEE
TYRLIYENNKLVKREFLYTDVYKPVDGVIKRGTKKVENSKSQEPPKTEKENNAQVNPEPP
EEEEEEECCCEEHHHHHHHHHHCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
QDNSEEDPAQP
CCCCCCCCCCC
>Mature Secondary Structure
MQAKGGTKKNNYFYIAIILLLLIFLSFSFAYFYLMLNSKVIAKGIFVNGISIGGMTKEES
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHH
VNFLKDKIKISSFSVTAKYQDKIFVITSEDINLSYNYQEMVEEAYKIGREGNPVERIREI
HHHHHHHEEEEEEEEEEEECCEEEEEEECCCCEEECHHHHHHHHHHCCCCCCHHHHHHHH
YVTEKEGKYFSFYPKYDENKLKEFVNRISQEIDKEPINAKIKITRGVKQITPDVEGVKVN
EEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCEEEC
KDKTLKNLKQLMDELIKGETEKPEVEIVADKVEAKVTKSMLEMINGRISTFSTVFNLQDA
CHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECC
NRSGNIAVAARAVNGTLLMPGETFSLNKTLGPRIIQNGYKEAPVIIGNKLVPDIGGGVCQ
CCCCCEEEEEEEECCEEEECCCCEECCCCCCHHHHHCCCCCCCEEECCEECCCCCCHHHH
IATTLYNAILRADIAITERYHHSFPVAYVPPGQDATISGDVLDLKFKNSTQYPIYIESYI
HHHHHHHHHHHHHHHEEHHHCCCCCEEEECCCCCCEECCCEEEEEECCCCCCCEEEEEEC
EGNKLVMNIYGYVKNPSRWIDIQSEIVEKYEPKIKYIDDPTLPQGEEVVDIQPHTGYKVN
CCCEEEEEEEEEECCCCCEEECHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCEEEE
TYRLIYENNKLVKREFLYTDVYKPVDGVIKRGTKKVENSKSQEPPKTEKENNAQVNPEPP
EEEEEEECCCEEHHHHHHHHHHCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
QDNSEEDPAQP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]