Click here to switch to the map view.

The map label for this gene is ychK [C]

Identifier: 167039925

GI number: 167039925

Start: 1319314

End: 1320534

Strand: Direct

Name: ychK [C]

Synonym: Teth514_1281

Alternate gene names: 167039925

Gene position: 1319314-1320534 (Clockwise)

Preceding gene: 167039924

Following gene: 167039926

Centisome position: 53.69

GC content: 32.51

Gene sequence:

>1221_bases
ATGTATGGAATTGTTTTAGAGGGTGGAGGTGCAAGGGGTGCATATCAGATAGGAGCTTACAAAGCTTTGGCTGAAGAAGG
TATAGAGGTAAGAGGGGTAGCAGGGACTTCTGTTGGAGCTTTGAATGGTGCTATTATTGCACAAGGTAATTTTGAAAAAG
CTTATGAACTGTGGCATGATATTTCTTATTCTAAAGTTATCAAGGCTAATGATGATGAAATTGAGAGGCTTAAAAAAGGA
AGATGGAGAAGAGAGGATATTTTTTTAGTTACGCAGTTGCTAAAGGGAATTATTGAGGAGGGTGGACTGGATATAACTCC
TCTTAAGAATTTGCTAAAAGAGGTTATAGACGAAAATAAGATAAGAAATTCAGGAAAAGACTTTGCGATTGTTACTGTTT
CTTTAAGTGATTTTAAGCCTATGGAACTATATATTGAAGACATACCTTATGGGAAACTTGTGGATTATTTGATGGCAAGT
GCTTATTTACCTGTCTTTAAAAGAGAGAAAATTGATGGAAAAAGTTATCTGGATGGAGGAGTATACAACAATCTTCCGGC
TGATTTACTCATAAAAAAAGGCTATAAAGATTTGATAATCATAAGGACTGGCAGTTTTGGCATAGTCAAAAAAATTGATT
TTAAAGGTTTAAATACATTAGTTATTTCTCCAAAGGAAGATTTAGGAGGGATTTTGGATTTTGATAAAAACGTTGTAAGG
TATAACCTTAAATTAGGATACTTTGATGGTTTAAAGGCTTTAAAAGGACTAAAGGGAGATAAGTATTATATCGAGCCGAA
AGGGGAAAAGGAATATTTTATCCGTTACCTTATGAATTTAGAAGAAAGAAGAATTGAGAATTTAAAGGATATCTTTAGAG
TAAATAAAGAAATTCCAGCAAAGAGAGCTTTGTTTGAAGTTATTATTCCTAAATTGTGCTCCTTATTGGATTTGAAAGTT
GATGCCGATTACGATGAAATATTTTTAACTCTTTTAGAAAATCTGGCGGAGATTTATGAAATAGAGAGATTTAGGGTTTA
TACCTACGAAAAGCTAATTAGCGCTGTAAGGGAGAAAATTAATTGTGACAAAGAAGCTGTTGAGGAAGATAAAGAAGAAA
TAGAAGAAATAATAGAAAGTGTAATTAAAAAGATAGATGTGCTTTCTATATTTACTAAAAACGAAGTTATAAAGGAAGTC
GGGAAAGTTATTTTTAGCTAA

Upstream 100 bases:

>100_bases
TTGTATTTGTACCTGCTGCATTGATTAATCAACTTTTTAATAGGAAAGTAAATCATGCCGCTAATGCTAAAAATTGAGTT
GTAAAATAGGGGTGGGAAAG

Downstream 100 bases:

>100_bases
CTTACTGTAAGACTGCTTAATTAGAGGACGGATAAAATGGAGATAGAGAGGTTGATAATCATTTTCTTGTGTGATATTAT
GAAACCAAAGAAATATGACC

Product: patatin

Products: NA

Alternate protein names: Phospholipase Patatin Family; Phospholipase; Patatin-Like Phospholipase; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase; Patatin-Like Phospholipase Family Protein; Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MYGIVLEGGGARGAYQIGAYKALAEEGIEVRGVAGTSVGALNGAIIAQGNFEKAYELWHDISYSKVIKANDDEIERLKKG
RWRREDIFLVTQLLKGIIEEGGLDITPLKNLLKEVIDENKIRNSGKDFAIVTVSLSDFKPMELYIEDIPYGKLVDYLMAS
AYLPVFKREKIDGKSYLDGGVYNNLPADLLIKKGYKDLIIIRTGSFGIVKKIDFKGLNTLVISPKEDLGGILDFDKNVVR
YNLKLGYFDGLKALKGLKGDKYYIEPKGEKEYFIRYLMNLEERRIENLKDIFRVNKEIPAKRALFEVIIPKLCSLLDLKV
DADYDEIFLTLLENLAEIYEIERFRVYTYEKLISAVREKINCDKEAVEEDKEEIEEIIESVIKKIDVLSIFTKNEVIKEV
GKVIFS

Sequences:

>Translated_406_residues
MYGIVLEGGGARGAYQIGAYKALAEEGIEVRGVAGTSVGALNGAIIAQGNFEKAYELWHDISYSKVIKANDDEIERLKKG
RWRREDIFLVTQLLKGIIEEGGLDITPLKNLLKEVIDENKIRNSGKDFAIVTVSLSDFKPMELYIEDIPYGKLVDYLMAS
AYLPVFKREKIDGKSYLDGGVYNNLPADLLIKKGYKDLIIIRTGSFGIVKKIDFKGLNTLVISPKEDLGGILDFDKNVVR
YNLKLGYFDGLKALKGLKGDKYYIEPKGEKEYFIRYLMNLEERRIENLKDIFRVNKEIPAKRALFEVIIPKLCSLLDLKV
DADYDEIFLTLLENLAEIYEIERFRVYTYEKLISAVREKINCDKEAVEEDKEEIEEIIESVIKKIDVLSIFTKNEVIKEV
GKVIFS
>Mature_406_residues
MYGIVLEGGGARGAYQIGAYKALAEEGIEVRGVAGTSVGALNGAIIAQGNFEKAYELWHDISYSKVIKANDDEIERLKKG
RWRREDIFLVTQLLKGIIEEGGLDITPLKNLLKEVIDENKIRNSGKDFAIVTVSLSDFKPMELYIEDIPYGKLVDYLMAS
AYLPVFKREKIDGKSYLDGGVYNNLPADLLIKKGYKDLIIIRTGSFGIVKKIDFKGLNTLVISPKEDLGGILDFDKNVVR
YNLKLGYFDGLKALKGLKGDKYYIEPKGEKEYFIRYLMNLEERRIENLKDIFRVNKEIPAKRALFEVIIPKLCSLLDLKV
DADYDEIFLTLLENLAEIYEIERFRVYTYEKLISAVREKINCDKEAVEEDKEEIEEIIESVIKKIDVLSIFTKNEVIKEV
GKVIFS

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148727335, Length=215, Percent_Identity=31.1627906976744, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI148727290, Length=215, Percent_Identity=31.1627906976744, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46263; Mature: 46263

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGIVLEGGGARGAYQIGAYKALAEEGIEVRGVAGTSVGALNGAIIAQGNFEKAYELWHD
CEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHC
ISYSKVIKANDDEIERLKKGRWRREDIFLVTQLLKGIIEEGGLDITPLKNLLKEVIDENK
CCHHHEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IRNSGKDFAIVTVSLSDFKPMELYIEDIPYGKLVDYLMASAYLPVFKREKIDGKSYLDGG
HHCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCHHCCCC
VYNNLPADLLIKKGYKDLIIIRTGSFGIVKKIDFKGLNTLVISPKEDLGGILDFDKNVVR
CCCCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCEEEECCHHHHCCHHCCCCCEEE
YNLKLGYFDGLKALKGLKGDKYYIEPKGEKEYFIRYLMNLEERRIENLKDIFRVNKEIPA
EEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KRALFEVIIPKLCSLLDLKVDADYDEIFLTLLENLAEIYEIERFRVYTYEKLISAVREKI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NCDKEAVEEDKEEIEEIIESVIKKIDVLSIFTKNEVIKEVGKVIFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYGIVLEGGGARGAYQIGAYKALAEEGIEVRGVAGTSVGALNGAIIAQGNFEKAYELWHD
CEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHC
ISYSKVIKANDDEIERLKKGRWRREDIFLVTQLLKGIIEEGGLDITPLKNLLKEVIDENK
CCHHHEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IRNSGKDFAIVTVSLSDFKPMELYIEDIPYGKLVDYLMASAYLPVFKREKIDGKSYLDGG
HHCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCHHCCCC
VYNNLPADLLIKKGYKDLIIIRTGSFGIVKKIDFKGLNTLVISPKEDLGGILDFDKNVVR
CCCCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCEEEECCHHHHCCHHCCCCCEEE
YNLKLGYFDGLKALKGLKGDKYYIEPKGEKEYFIRYLMNLEERRIENLKDIFRVNKEIPA
EEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KRALFEVIIPKLCSLLDLKVDADYDEIFLTLLENLAEIYEIERFRVYTYEKLISAVREKI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NCDKEAVEEDKEEIEEIIESVIKKIDVLSIFTKNEVIKEVGKVIFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA